Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN3Q9BTN0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN3Q9BTN0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
LRFN3Q9BTN0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN3Q9BTN0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN3Q9BTN0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN3Q9BTN0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.46■□□□□ 0.39
LRFN3Q9BTN0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN3Q9BTN0 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.46■□□□□ 0.39
LRFN3Q9BTN0 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.46■□□□□ 0.39
LRFN3Q9BTN0 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.46■□□□□ 0.39
LRFN3Q9BTN0 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN3Q9BTN0 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.46■□□□□ 0.39
LRFN3Q9BTN0 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.46■□□□□ 0.39
LRFN3Q9BTN0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
LRFN3Q9BTN0 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.46■□□□□ 0.39
LRFN3Q9BTN0 AC103810.3-201ENST00000583567 96 ntBASIC17.46■□□□□ 0.39
LRFN3Q9BTN0 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN3Q9BTN0 AL109936.8-201ENST00000641772 604 ntBASIC17.46■□□□□ 0.39
LRFN3Q9BTN0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.46■□□□□ 0.39
LRFN3Q9BTN0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.46■□□□□ 0.39
LRFN3Q9BTN0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN3Q9BTN0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN3Q9BTN0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN3Q9BTN0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN3Q9BTN0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 AC020907.1-201ENST00000616460 1350 ntBASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN3Q9BTN0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms