Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK4Q8NE63 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK4Q8NE63 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
HIPK4Q8NE63 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK4Q8NE63 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK4Q8NE63 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK4Q8NE63 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
HIPK4Q8NE63 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
HIPK4Q8NE63 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK4Q8NE63 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK4Q8NE63 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.21■□□□□ 0.35
HIPK4Q8NE63 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.21■□□□□ 0.35
HIPK4Q8NE63 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.21■□□□□ 0.35
HIPK4Q8NE63 CD177P1-201ENST00000606252 935 ntBASIC17.21■□□□□ 0.35
HIPK4Q8NE63 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK4Q8NE63 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK4Q8NE63 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.21■□□□□ 0.35
HIPK4Q8NE63 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK4Q8NE63 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK4Q8NE63 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK4Q8NE63 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK4Q8NE63 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HIPK4Q8NE63 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HIPK4Q8NE63 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HIPK4Q8NE63 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 MFAP1P1-201ENST00000442257 1255 ntBASIC17.2■□□□□ 0.34
HIPK4Q8NE63 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 KRT8P50-201ENST00000562022 1438 ntBASIC17.2■□□□□ 0.34
HIPK4Q8NE63 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK4Q8NE63 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK4Q8NE63 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK4Q8NE63 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK4Q8NE63 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK4Q8NE63 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
HIPK4Q8NE63 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK4Q8NE63 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
HIPK4Q8NE63 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.19■□□□□ 0.34
HIPK4Q8NE63 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK4Q8NE63 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK4Q8NE63 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.19■□□□□ 0.34
HIPK4Q8NE63 AC093010.1-201ENST00000473625 1624 ntBASIC17.19■□□□□ 0.34
HIPK4Q8NE63 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK4Q8NE63 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
HIPK4Q8NE63 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK4Q8NE63 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK4Q8NE63 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.19■□□□□ 0.34
HIPK4Q8NE63 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.19■□□□□ 0.34
HIPK4Q8NE63 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK4Q8NE63 SLC25A1P4-201ENST00000567977 778 ntBASIC17.19■□□□□ 0.34
HIPK4Q8NE63 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.19■□□□□ 0.34
HIPK4Q8NE63 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
HIPK4Q8NE63 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK4Q8NE63 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK4Q8NE63 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.19■□□□□ 0.34
HIPK4Q8NE63 AC133963.1-201ENST00000504166 1679 ntBASIC17.19■□□□□ 0.34
HIPK4Q8NE63 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK4Q8NE63 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK4Q8NE63 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.19■□□□□ 0.34
HIPK4Q8NE63 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK4Q8NE63 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms