Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 AC096633.1-201ENST00000422446 749 ntBASIC16.21■□□□□ 0.19
LSMEM1Q8N8F7 AC005104.2-201ENST00000427818 678 ntBASIC16.21■□□□□ 0.19
LSMEM1Q8N8F7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LSMEM1Q8N8F7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.21■□□□□ 0.19
LSMEM1Q8N8F7 RNF126P1-202ENST00000569893 925 ntBASIC16.21■□□□□ 0.19
LSMEM1Q8N8F7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.21■□□□□ 0.19
LSMEM1Q8N8F7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.21■□□□□ 0.19
LSMEM1Q8N8F7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LSMEM1Q8N8F7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LSMEM1Q8N8F7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LSMEM1Q8N8F7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LSMEM1Q8N8F7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.21■□□□□ 0.19
LSMEM1Q8N8F7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LSMEM1Q8N8F7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.18
LSMEM1Q8N8F7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
LSMEM1Q8N8F7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LSMEM1Q8N8F7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
LSMEM1Q8N8F7 AC097374.2-201ENST00000618617 1306 ntBASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 AC108860.2-201ENST00000562760 2183 ntBASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 AL023806.1-201ENST00000603994 1649 ntBASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 DUX4L26-201ENST00000489078 1255 ntBASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
LSMEM1Q8N8F7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 AL671277.2-201ENST00000458060 996 ntBASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 RN7SL850P-201ENST00000579959 291 ntBASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LSMEM1Q8N8F7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSMEM1Q8N8F7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms