Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.58■□□□□ 0.4
NUDCD3Q8IVD9 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NUDCD3Q8IVD9 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NUDCD3Q8IVD9 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NUDCD3Q8IVD9 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.58■□□□□ 0.4
NUDCD3Q8IVD9 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 AGGF1P2-201ENST00000426656 2106 ntBASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 DDX43P3-201ENST00000441064 443 ntBASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 SEC1P-202ENST00000473944 940 ntBASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 AC026471.5-201ENST00000615068 467 ntBASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NUDCD3Q8IVD9 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 AC007663.1-201ENST00000438948 1240 ntBASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 AC116562.4-202ENST00000641738 218 ntBASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 AL049637.2-201ENST00000641778 930 ntBASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUDCD3Q8IVD9 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 AC016396.2-201ENST00000562575 1417 ntBASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 PCDHA14-201ENST00000506751 2298 ntBASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms