Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC19.63■□□□□ 0.73
COL13A1Q5TAT6 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.63■□□□□ 0.73
COL13A1Q5TAT6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.63■□□□□ 0.73
COL13A1Q5TAT6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
COL13A1Q5TAT6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.63■□□□□ 0.73
COL13A1Q5TAT6 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC19.63■□□□□ 0.73
COL13A1Q5TAT6 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC19.63■□□□□ 0.73
COL13A1Q5TAT6 AL161645.1-201ENST00000622716 1255 ntBASIC19.63■□□□□ 0.73
COL13A1Q5TAT6 RPL35-206ENST00000629845 340 ntTSL 5 BASIC19.63■□□□□ 0.73
COL13A1Q5TAT6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL13A1Q5TAT6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL13A1Q5TAT6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL13A1Q5TAT6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
COL13A1Q5TAT6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL13A1Q5TAT6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL13A1Q5TAT6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL13A1Q5TAT6 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.62■□□□□ 0.73
COL13A1Q5TAT6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.62■□□□□ 0.73
COL13A1Q5TAT6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL13A1Q5TAT6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
COL13A1Q5TAT6 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL13A1Q5TAT6 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC19.62■□□□□ 0.73
COL13A1Q5TAT6 AC092978.1-202ENST00000637590 1327 ntBASIC19.62■□□□□ 0.73
COL13A1Q5TAT6 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
COL13A1Q5TAT6 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL13A1Q5TAT6 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL13A1Q5TAT6 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
COL13A1Q5TAT6 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC19.62■□□□□ 0.73
COL13A1Q5TAT6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC19.62■□□□□ 0.73
COL13A1Q5TAT6 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC19.62■□□□□ 0.73
COL13A1Q5TAT6 AC007389.4-201ENST00000454674 793 ntBASIC19.62■□□□□ 0.73
COL13A1Q5TAT6 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC19.62■□□□□ 0.73
COL13A1Q5TAT6 HLA-V-204ENST00000476601 1289 ntBASIC19.62■□□□□ 0.73
COL13A1Q5TAT6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.62■□□□□ 0.73
COL13A1Q5TAT6 AC135586.1-201ENST00000539323 574 ntBASIC19.62■□□□□ 0.73
COL13A1Q5TAT6 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC19.62■□□□□ 0.73
COL13A1Q5TAT6 C2orf69P2-201ENST00000562032 1123 ntBASIC19.62■□□□□ 0.73
COL13A1Q5TAT6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL13A1Q5TAT6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL13A1Q5TAT6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL13A1Q5TAT6 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
COL13A1Q5TAT6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
COL13A1Q5TAT6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL13A1Q5TAT6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL13A1Q5TAT6 AL049757.1-201ENST00000616842 1596 ntBASIC19.61■□□□□ 0.73
COL13A1Q5TAT6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL13A1Q5TAT6 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL13A1Q5TAT6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL13A1Q5TAT6 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.61■□□□□ 0.73
COL13A1Q5TAT6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
COL13A1Q5TAT6 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL13A1Q5TAT6 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC19.61■□□□□ 0.73
COL13A1Q5TAT6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL13A1Q5TAT6 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
COL13A1Q5TAT6 NUS1P3-201ENST00000423502 862 ntBASIC19.61■□□□□ 0.73
COL13A1Q5TAT6 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC19.61■□□□□ 0.73
COL13A1Q5TAT6 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC19.61■□□□□ 0.73
COL13A1Q5TAT6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.61■□□□□ 0.73
COL13A1Q5TAT6 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC19.61■□□□□ 0.73
COL13A1Q5TAT6 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC19.61■□□□□ 0.73
COL13A1Q5TAT6 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC19.61■□□□□ 0.73
COL13A1Q5TAT6 AL844908.2-201ENST00000609461 460 ntBASIC19.61■□□□□ 0.73
COL13A1Q5TAT6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL13A1Q5TAT6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
COL13A1Q5TAT6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL13A1Q5TAT6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
COL13A1Q5TAT6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL13A1Q5TAT6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL13A1Q5TAT6 AC087499.5-201ENST00000452760 1342 ntBASIC19.6■□□□□ 0.73
COL13A1Q5TAT6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL13A1Q5TAT6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
COL13A1Q5TAT6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
COL13A1Q5TAT6 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL13A1Q5TAT6 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
COL13A1Q5TAT6 SPDYE19P-201ENST00000338590 713 ntBASIC19.6■□□□□ 0.73
COL13A1Q5TAT6 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL13A1Q5TAT6 LINC00982-205ENST00000420957 435 ntBASIC19.6■□□□□ 0.73
COL13A1Q5TAT6 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC19.6■□□□□ 0.73
COL13A1Q5TAT6 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC19.6■□□□□ 0.73
COL13A1Q5TAT6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.6■□□□□ 0.73
COL13A1Q5TAT6 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC19.6■□□□□ 0.73
COL13A1Q5TAT6 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC19.6■□□□□ 0.73
COL13A1Q5TAT6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL13A1Q5TAT6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
COL13A1Q5TAT6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.6■□□□□ 0.73
COL13A1Q5TAT6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL13A1Q5TAT6 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.6■□□□□ 0.73
COL13A1Q5TAT6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL13A1Q5TAT6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms