Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.43■□□□□ 0.38
SRP54P61011 AC090164.3-201ENST00000610780 2143 ntBASIC17.43■□□□□ 0.38
SRP54P61011 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.43■□□□□ 0.38
SRP54P61011 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.43■□□□□ 0.38
SRP54P61011 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
SRP54P61011 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SRP54P61011 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SRP54P61011 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRP54P61011 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SRP54P61011 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.43■□□□□ 0.38
SRP54P61011 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
SRP54P61011 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRP54P61011 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.43■□□□□ 0.38
SRP54P61011 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRP54P61011 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.43■□□□□ 0.38
SRP54P61011 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRP54P61011 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRP54P61011 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRP54P61011 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
SRP54P61011 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRP54P61011 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.42■□□□□ 0.38
SRP54P61011 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRP54P61011 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRP54P61011 AC243591.1-201ENST00000452967 1364 ntBASIC17.42■□□□□ 0.38
SRP54P61011 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRP54P61011 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.42■□□□□ 0.38
SRP54P61011 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SRP54P61011 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRP54P61011 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRP54P61011 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.42■□□□□ 0.38
SRP54P61011 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.42■□□□□ 0.38
SRP54P61011 RPS2P1-201ENST00000434010 821 ntBASIC17.42■□□□□ 0.38
SRP54P61011 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SRP54P61011 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRP54P61011 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.42■□□□□ 0.38
SRP54P61011 AC139887.3-201ENST00000568585 713 ntBASIC17.42■□□□□ 0.38
SRP54P61011 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRP54P61011 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SRP54P61011 AC116407.2-201ENST00000613639 860 ntBASIC17.42■□□□□ 0.38
SRP54P61011 MIR7706-201ENST00000613747 67 ntBASIC17.42■□□□□ 0.38
SRP54P61011 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SRP54P61011 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.42■□□□□ 0.38
SRP54P61011 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRP54P61011 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.42■□□□□ 0.38
SRP54P61011 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.42■□□□□ 0.38
SRP54P61011 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRP54P61011 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SRP54P61011 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRP54P61011 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.42■□□□□ 0.38
SRP54P61011 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRP54P61011 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRP54P61011 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRP54P61011 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.41■□□□□ 0.38
SRP54P61011 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SRP54P61011 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
SRP54P61011 PMPCAP1-201ENST00000508114 1576 ntBASIC17.41■□□□□ 0.38
SRP54P61011 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SRP54P61011 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRP54P61011 FZD10-202ENST00000539839 3282 ntBASIC17.41■□□□□ 0.38
SRP54P61011 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRP54P61011 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SRP54P61011 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRP54P61011 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SRP54P61011 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.41■□□□□ 0.38
SRP54P61011 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRP54P61011 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.41■□□□□ 0.38
SRP54P61011 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.41■□□□□ 0.38
SRP54P61011 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.41■□□□□ 0.38
SRP54P61011 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.41■□□□□ 0.38
SRP54P61011 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SRP54P61011 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.41■□□□□ 0.38
SRP54P61011 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.41■□□□□ 0.38
SRP54P61011 AD001527.2-201ENST00000622994 785 ntBASIC17.41■□□□□ 0.38
SRP54P61011 AF228730.7-201ENST00000641842 219 ntBASIC17.41■□□□□ 0.38
SRP54P61011 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRP54P61011 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.41■□□□□ 0.38
SRP54P61011 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRP54P61011 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRP54P61011 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SRP54P61011 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRP54P61011 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.41■□□□□ 0.38
SRP54P61011 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SRP54P61011 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.41■□□□□ 0.38
SRP54P61011 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.41■□□□□ 0.38
SRP54P61011 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
SRP54P61011 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.41■□□□□ 0.38
SRP54P61011 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRP54P61011 AC007613.1-201ENST00000572811 2597 ntBASIC17.4■□□□□ 0.38
SRP54P61011 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SRP54P61011 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRP54P61011 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SRP54P61011 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.4■□□□□ 0.38
SRP54P61011 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRP54P61011 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRP54P61011 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRP54P61011 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRP54P61011 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SRP54P61011 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.4■□□□□ 0.38
SRP54P61011 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.4■□□□□ 0.38
SRP54P61011 OR7E14P-202ENST00000530490 1290 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms