Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS1P54277 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS1P54277 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS1P54277 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.42■□□□□ 0.7
PMS1P54277 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS1P54277 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.42■□□□□ 0.7
PMS1P54277 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PMS1P54277 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS1P54277 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.42■□□□□ 0.7
PMS1P54277 AL031133.1-201ENST00000406807 723 ntBASIC19.42■□□□□ 0.7
PMS1P54277 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.42■□□□□ 0.7
PMS1P54277 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.42■□□□□ 0.7
PMS1P54277 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PMS1P54277 AL136038.3-201ENST00000561909 1096 ntBASIC19.42■□□□□ 0.7
PMS1P54277 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PMS1P54277 AC011498.5-201ENST00000592027 486 ntBASIC19.42■□□□□ 0.7
PMS1P54277 AC005336.2-201ENST00000593183 939 ntBASIC19.42■□□□□ 0.7
PMS1P54277 AL353801.3-201ENST00000609898 542 ntBASIC19.42■□□□□ 0.7
PMS1P54277 AL592071.1-201ENST00000611956 408 ntBASIC19.42■□□□□ 0.7
PMS1P54277 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PMS1P54277 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.42■□□□□ 0.7
PMS1P54277 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS1P54277 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.42■□□□□ 0.7
PMS1P54277 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS1P54277 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS1P54277 AC097374.2-201ENST00000618617 1306 ntBASIC19.42■□□□□ 0.7
PMS1P54277 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PMS1P54277 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS1P54277 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PMS1P54277 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS1P54277 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.42■□□□□ 0.7
PMS1P54277 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS1P54277 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS1P54277 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS1P54277 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS1P54277 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS1P54277 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS1P54277 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.42■□□□□ 0.7
PMS1P54277 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMS1P54277 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMS1P54277 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMS1P54277 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.41■□□□□ 0.7
PMS1P54277 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PMS1P54277 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMS1P54277 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.41■□□□□ 0.7
PMS1P54277 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.41■□□□□ 0.7
PMS1P54277 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMS1P54277 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PMS1P54277 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMS1P54277 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PMS1P54277 COX5BP2-201ENST00000392354 334 ntBASIC19.41■□□□□ 0.7
PMS1P54277 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PMS1P54277 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.41■□□□□ 0.7
PMS1P54277 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.41■□□□□ 0.7
PMS1P54277 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.41■□□□□ 0.7
PMS1P54277 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.41■□□□□ 0.7
PMS1P54277 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.41■□□□□ 0.7
PMS1P54277 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMS1P54277 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PMS1P54277 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMS1P54277 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PMS1P54277 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.41■□□□□ 0.7
PMS1P54277 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PMS1P54277 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMS1P54277 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMS1P54277 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.41■□□□□ 0.7
PMS1P54277 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PMS1P54277 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.4■□□□□ 0.7
PMS1P54277 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PMS1P54277 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PMS1P54277 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PMS1P54277 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
PMS1P54277 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PMS1P54277 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PMS1P54277 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PMS1P54277 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PMS1P54277 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
PMS1P54277 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PMS1P54277 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PMS1P54277 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.4■□□□□ 0.7
PMS1P54277 AC007967.3-201ENST00000434308 558 ntBASIC19.4■□□□□ 0.7
PMS1P54277 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PMS1P54277 AC091607.1-201ENST00000490318 1060 ntBASIC19.4■□□□□ 0.7
PMS1P54277 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.4■□□□□ 0.7
PMS1P54277 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PMS1P54277 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PMS1P54277 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.4■□□□□ 0.7
PMS1P54277 AC124864.1-201ENST00000623408 392 ntBASIC19.4■□□□□ 0.7
PMS1P54277 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PMS1P54277 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.4■□□□□ 0.7
PMS1P54277 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PMS1P54277 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.4■□□□□ 0.7
PMS1P54277 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PMS1P54277 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.4■□□□□ 0.7
PMS1P54277 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PMS1P54277 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PMS1P54277 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
PMS1P54277 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PMS1P54277 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
PMS1P54277 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms