Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PSEN1P49768 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PSEN1P49768 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PSEN1P49768 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PSEN1P49768 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PSEN1P49768 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PSEN1P49768 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PSEN1P49768 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PSEN1P49768 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PSEN1P49768 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PSEN1P49768 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PSEN1P49768 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PSEN1P49768 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PSEN1P49768 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PSEN1P49768 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC18.78■□□□□ 0.6
PSEN1P49768 AC091607.1-201ENST00000490318 1060 ntBASIC18.78■□□□□ 0.6
PSEN1P49768 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC18.78■□□□□ 0.6
PSEN1P49768 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PSEN1P49768 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.78■□□□□ 0.6
PSEN1P49768 AC107308.1-201ENST00000615897 301 ntBASIC18.78■□□□□ 0.6
PSEN1P49768 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PSEN1P49768 AC092723.2-201ENST00000624955 793 ntBASIC18.78■□□□□ 0.6
PSEN1P49768 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PSEN1P49768 AL096828.2-201ENST00000567259 1965 ntBASIC18.78■□□□□ 0.6
PSEN1P49768 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
PSEN1P49768 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PSEN1P49768 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PSEN1P49768 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PSEN1P49768 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PSEN1P49768 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PSEN1P49768 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.78■□□□□ 0.6
PSEN1P49768 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.77■□□□□ 0.6
PSEN1P49768 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PSEN1P49768 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PSEN1P49768 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.77■□□□□ 0.6
PSEN1P49768 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.77■□□□□ 0.6
PSEN1P49768 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.77■□□□□ 0.6
PSEN1P49768 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PSEN1P49768 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PSEN1P49768 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PSEN1P49768 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PSEN1P49768 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PSEN1P49768 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PSEN1P49768 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PSEN1P49768 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PSEN1P49768 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PSEN1P49768 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.77■□□□□ 0.6
PSEN1P49768 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.77■□□□□ 0.6
PSEN1P49768 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.77■□□□□ 0.6
PSEN1P49768 FOSL1P1-201ENST00000511041 816 ntBASIC18.77■□□□□ 0.6
PSEN1P49768 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.77■□□□□ 0.6
PSEN1P49768 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PSEN1P49768 AC009533.2-201ENST00000543664 586 ntBASIC18.77■□□□□ 0.6
PSEN1P49768 AC111152.3-201ENST00000569699 673 ntBASIC18.77■□□□□ 0.6
PSEN1P49768 LINC01711-201ENST00000598340 967 ntBASIC18.77■□□□□ 0.6
PSEN1P49768 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.77■□□□□ 0.6
PSEN1P49768 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.77■□□□□ 0.6
PSEN1P49768 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PSEN1P49768 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PSEN1P49768 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC18.77■□□□□ 0.6
PSEN1P49768 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PSEN1P49768 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PSEN1P49768 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PSEN1P49768 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PSEN1P49768 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PSEN1P49768 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PSEN1P49768 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
PSEN1P49768 PCDHA1-201ENST00000378133 2726 ntBASIC18.77■□□□□ 0.59
PSEN1P49768 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PSEN1P49768 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PSEN1P49768 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
PSEN1P49768 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
PSEN1P49768 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PSEN1P49768 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.59
PSEN1P49768 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.59
PSEN1P49768 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
PSEN1P49768 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.76■□□□□ 0.59
PSEN1P49768 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PSEN1P49768 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PSEN1P49768 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PSEN1P49768 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PSEN1P49768 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.76■□□□□ 0.59
PSEN1P49768 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PSEN1P49768 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PSEN1P49768 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PSEN1P49768 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.76■□□□□ 0.59
PSEN1P49768 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PSEN1P49768 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.76■□□□□ 0.59
PSEN1P49768 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.76■□□□□ 0.59
PSEN1P49768 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PSEN1P49768 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PSEN1P49768 KRT16P4-201ENST00000453883 522 ntBASIC18.76■□□□□ 0.59
PSEN1P49768 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PSEN1P49768 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC18.76■□□□□ 0.59
PSEN1P49768 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.76■□□□□ 0.59
PSEN1P49768 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.76■□□□□ 0.59
PSEN1P49768 AC091304.2-201ENST00000564639 760 ntBASIC18.76■□□□□ 0.59
PSEN1P49768 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.76■□□□□ 0.59
PSEN1P49768 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC18.76■□□□□ 0.59
PSEN1P49768 AC005336.2-201ENST00000593183 939 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms