Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP13P45452 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.39■□□□□ 0.53
MMP13P45452 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.39■□□□□ 0.53
MMP13P45452 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MMP13P45452 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.39■□□□□ 0.53
MMP13P45452 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP13P45452 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.39■□□□□ 0.53
MMP13P45452 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.39■□□□□ 0.53
MMP13P45452 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.39■□□□□ 0.53
MMP13P45452 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.39■□□□□ 0.53
MMP13P45452 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
MMP13P45452 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP13P45452 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP13P45452 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP13P45452 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MMP13P45452 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP13P45452 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.39■□□□□ 0.53
MMP13P45452 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP13P45452 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MMP13P45452 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP13P45452 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
MMP13P45452 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP13P45452 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP13P45452 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MMP13P45452 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP13P45452 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MMP13P45452 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP13P45452 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP13P45452 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP13P45452 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.38■□□□□ 0.53
MMP13P45452 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP13P45452 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
MMP13P45452 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP13P45452 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.38■□□□□ 0.53
MMP13P45452 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
MMP13P45452 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MMP13P45452 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
MMP13P45452 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP13P45452 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MMP13P45452 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.38■□□□□ 0.53
MMP13P45452 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.38■□□□□ 0.53
MMP13P45452 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP13P45452 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MMP13P45452 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.38■□□□□ 0.53
MMP13P45452 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP13P45452 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP13P45452 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.38■□□□□ 0.53
MMP13P45452 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.38■□□□□ 0.53
MMP13P45452 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.38■□□□□ 0.53
MMP13P45452 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.38■□□□□ 0.53
MMP13P45452 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.38■□□□□ 0.53
MMP13P45452 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
MMP13P45452 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.38■□□□□ 0.53
MMP13P45452 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.38■□□□□ 0.53
MMP13P45452 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
MMP13P45452 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP13P45452 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP13P45452 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.38■□□□□ 0.53
MMP13P45452 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.38■□□□□ 0.53
MMP13P45452 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP13P45452 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP13P45452 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
MMP13P45452 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP13P45452 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MMP13P45452 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP13P45452 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MMP13P45452 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP13P45452 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP13P45452 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP13P45452 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.37■□□□□ 0.53
MMP13P45452 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP13P45452 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
MMP13P45452 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP13P45452 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
MMP13P45452 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MMP13P45452 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.37■□□□□ 0.53
MMP13P45452 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
MMP13P45452 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP13P45452 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.37■□□□□ 0.53
MMP13P45452 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.37■□□□□ 0.53
MMP13P45452 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP13P45452 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP13P45452 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP13P45452 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP13P45452 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.37■□□□□ 0.53
MMP13P45452 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.37■□□□□ 0.53
MMP13P45452 TSPY12P-201ENST00000421279 868 ntBASIC18.37■□□□□ 0.53
MMP13P45452 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MMP13P45452 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.37■□□□□ 0.53
MMP13P45452 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
MMP13P45452 DUTP2-201ENST00000519164 463 ntBASIC18.37■□□□□ 0.53
MMP13P45452 AC011498.5-201ENST00000592027 486 ntBASIC18.37■□□□□ 0.53
MMP13P45452 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.37■□□□□ 0.53
MMP13P45452 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.37■□□□□ 0.53
MMP13P45452 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.37■□□□□ 0.53
MMP13P45452 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP13P45452 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP13P45452 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MMP13P45452 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP13P45452 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms