Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCNAP12004 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.26■□□□□ 0.35
PCNAP12004 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCNAP12004 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.26■□□□□ 0.35
PCNAP12004 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PCNAP12004 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.26■□□□□ 0.35
PCNAP12004 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCNAP12004 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCNAP12004 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCNAP12004 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.26■□□□□ 0.35
PCNAP12004 KRT18P65-201ENST00000439811 1286 ntBASIC17.26■□□□□ 0.35
PCNAP12004 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.26■□□□□ 0.35
PCNAP12004 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCNAP12004 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.26■□□□□ 0.35
PCNAP12004 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.26■□□□□ 0.35
PCNAP12004 HYMAI.1-201ENST00000620949 238 ntBASIC17.26■□□□□ 0.35
PCNAP12004 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCNAP12004 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.26■□□□□ 0.35
PCNAP12004 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCNAP12004 AC006116.8-202ENST00000587620 1550 ntBASIC17.26■□□□□ 0.35
PCNAP12004 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCNAP12004 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCNAP12004 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCNAP12004 AC108860.2-201ENST00000562760 2183 ntBASIC17.26■□□□□ 0.35
PCNAP12004 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.26■□□□□ 0.35
PCNAP12004 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PCNAP12004 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PCNAP12004 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCNAP12004 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PCNAP12004 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCNAP12004 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCNAP12004 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCNAP12004 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCNAP12004 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
PCNAP12004 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
PCNAP12004 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCNAP12004 MIR662-201ENST00000384847 95 ntBASIC17.25■□□□□ 0.35
PCNAP12004 IGHGP-201ENST00000390555 1178 ntBASIC17.25■□□□□ 0.35
PCNAP12004 AL671277.2-201ENST00000458060 996 ntBASIC17.25■□□□□ 0.35
PCNAP12004 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.25■□□□□ 0.35
PCNAP12004 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.25■□□□□ 0.35
PCNAP12004 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
PCNAP12004 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.25■□□□□ 0.35
PCNAP12004 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PCNAP12004 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.25■□□□□ 0.35
PCNAP12004 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PCNAP12004 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCNAP12004 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCNAP12004 PP12613-201ENST00000424958 2230 ntBASIC17.25■□□□□ 0.35
PCNAP12004 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCNAP12004 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.25■□□□□ 0.35
PCNAP12004 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCNAP12004 SIRPAP1-201ENST00000448467 1770 ntBASIC17.25■□□□□ 0.35
PCNAP12004 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCNAP12004 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCNAP12004 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.25■□□□□ 0.35
PCNAP12004 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCNAP12004 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCNAP12004 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCNAP12004 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCNAP12004 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCNAP12004 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCNAP12004 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCNAP12004 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCNAP12004 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCNAP12004 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.24■□□□□ 0.35
PCNAP12004 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCNAP12004 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCNAP12004 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCNAP12004 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCNAP12004 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCNAP12004 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCNAP12004 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.24■□□□□ 0.35
PCNAP12004 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCNAP12004 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.24■□□□□ 0.35
PCNAP12004 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.24■□□□□ 0.35
PCNAP12004 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.24■□□□□ 0.35
PCNAP12004 GPR32P1-201ENST00000601788 811 ntBASIC17.24■□□□□ 0.35
PCNAP12004 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.24■□□□□ 0.35
PCNAP12004 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCNAP12004 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCNAP12004 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PCNAP12004 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PCNAP12004 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCNAP12004 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.24■□□□□ 0.35
PCNAP12004 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCNAP12004 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCNAP12004 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCNAP12004 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCNAP12004 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.24■□□□□ 0.35
PCNAP12004 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCNAP12004 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.24■□□□□ 0.35
PCNAP12004 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCNAP12004 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PCNAP12004 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCNAP12004 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCNAP12004 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCNAP12004 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCNAP12004 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PCNAP12004 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms