Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ALDH1A1P00352 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ALDH1A1P00352 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ALDH1A1P00352 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
ALDH1A1P00352 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
ALDH1A1P00352 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.02■□□□□ 0.79
ALDH1A1P00352 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ALDH1A1P00352 AL590787.1-201ENST00000568856 1315 ntBASIC20.02■□□□□ 0.79
ALDH1A1P00352 AC129492.6-201ENST00000611383 1305 ntBASIC20.02■□□□□ 0.79
ALDH1A1P00352 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ALDH1A1P00352 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.01■□□□□ 0.79
ALDH1A1P00352 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ALDH1A1P00352 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ALDH1A1P00352 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.01■□□□□ 0.79
ALDH1A1P00352 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ALDH1A1P00352 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.01■□□□□ 0.79
ALDH1A1P00352 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ALDH1A1P00352 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.01■□□□□ 0.79
ALDH1A1P00352 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ALDH1A1P00352 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ALDH1A1P00352 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ALDH1A1P00352 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
ALDH1A1P00352 FO538757.1-201ENST00000623083 1397 ntBASIC20.01■□□□□ 0.79
ALDH1A1P00352 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ALDH1A1P00352 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ALDH1A1P00352 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC20.01■□□□□ 0.79
ALDH1A1P00352 MYCLP1-201ENST00000372451 1075 ntBASIC20.01■□□□□ 0.79
ALDH1A1P00352 WRB-204ENST00000398753 699 ntTSL 3 BASIC20.01■□□□□ 0.79
ALDH1A1P00352 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC20.01■□□□□ 0.79
ALDH1A1P00352 CRB3P1-201ENST00000449338 276 ntBASIC20.01■□□□□ 0.79
ALDH1A1P00352 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC20.01■□□□□ 0.79
ALDH1A1P00352 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.01■□□□□ 0.79
ALDH1A1P00352 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC20.01■□□□□ 0.79
ALDH1A1P00352 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC20.01■□□□□ 0.79
ALDH1A1P00352 AL645728.2-201ENST00000641974 660 ntBASIC20.01■□□□□ 0.79
ALDH1A1P00352 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ALDH1A1P00352 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ALDH1A1P00352 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ALDH1A1P00352 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ALDH1A1P00352 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.01■□□□□ 0.79
ALDH1A1P00352 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ALDH1A1P00352 AKAP8P1-201ENST00000434743 1349 ntBASIC20.01■□□□□ 0.79
ALDH1A1P00352 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ALDH1A1P00352 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20■□□□□ 0.79
ALDH1A1P00352 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ALDH1A1P00352 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
ALDH1A1P00352 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ALDH1A1P00352 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
ALDH1A1P00352 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
ALDH1A1P00352 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ALDH1A1P00352 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ALDH1A1P00352 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC20■□□□□ 0.79
ALDH1A1P00352 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ALDH1A1P00352 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC20■□□□□ 0.79
ALDH1A1P00352 SPDYE7P-202ENST00000420373 878 ntBASIC20■□□□□ 0.79
ALDH1A1P00352 FAM58DP-201ENST00000428076 619 ntBASIC20■□□□□ 0.79
ALDH1A1P00352 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC20■□□□□ 0.79
ALDH1A1P00352 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
ALDH1A1P00352 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
ALDH1A1P00352 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
ALDH1A1P00352 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC20■□□□□ 0.79
ALDH1A1P00352 IGHV3-42-201ENST00000520410 361 ntBASIC20■□□□□ 0.79
ALDH1A1P00352 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC20■□□□□ 0.79
ALDH1A1P00352 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20■□□□□ 0.79
ALDH1A1P00352 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
ALDH1A1P00352 AL158211.3-201ENST00000607385 239 ntBASIC20■□□□□ 0.79
ALDH1A1P00352 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
ALDH1A1P00352 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ALDH1A1P00352 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ALDH1A1P00352 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20■□□□□ 0.79
ALDH1A1P00352 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ALDH1A1P00352 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
ALDH1A1P00352 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.99■□□□□ 0.79
ALDH1A1P00352 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ALDH1A1P00352 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
ALDH1A1P00352 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
ALDH1A1P00352 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.99■□□□□ 0.79
ALDH1A1P00352 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
ALDH1A1P00352 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ALDH1A1P00352 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ALDH1A1P00352 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.99■□□□□ 0.79
ALDH1A1P00352 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.99■□□□□ 0.79
ALDH1A1P00352 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ALDH1A1P00352 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
ALDH1A1P00352 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ALDH1A1P00352 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.99■□□□□ 0.79
ALDH1A1P00352 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.99■□□□□ 0.79
ALDH1A1P00352 RBPMS2P1-201ENST00000437762 623 ntBASIC19.99■□□□□ 0.79
ALDH1A1P00352 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.99■□□□□ 0.79
ALDH1A1P00352 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.99■□□□□ 0.79
ALDH1A1P00352 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.99■□□□□ 0.79
ALDH1A1P00352 AC243562.1-201ENST00000560672 389 ntBASIC19.99■□□□□ 0.79
ALDH1A1P00352 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC19.99■□□□□ 0.79
ALDH1A1P00352 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ALDH1A1P00352 AL390754.1-201ENST00000619088 582 ntBASIC19.99■□□□□ 0.79
ALDH1A1P00352 SERF2-217ENST00000630046 862 ntTSL 5 BASIC19.99■□□□□ 0.79
ALDH1A1P00352 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.99■□□□□ 0.79
ALDH1A1P00352 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ALDH1A1P00352 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
ALDH1A1P00352 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms