Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CLOCKO15516 KRT18P22-201ENST00000402024 1347 ntBASIC16.83■□□□□ 0.28
CLOCKO15516 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLOCKO15516 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLOCKO15516 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.83■□□□□ 0.28
CLOCKO15516 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLOCKO15516 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLOCKO15516 GPAT2P1-201ENST00000444924 1672 ntBASIC16.83■□□□□ 0.28
CLOCKO15516 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.83■□□□□ 0.28
CLOCKO15516 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.83■□□□□ 0.28
CLOCKO15516 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLOCKO15516 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
CLOCKO15516 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLOCKO15516 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLOCKO15516 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.83■□□□□ 0.28
CLOCKO15516 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CLOCKO15516 LINC01126-201ENST00000623515 1646 ntBASIC16.83■□□□□ 0.28
CLOCKO15516 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CLOCKO15516 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLOCKO15516 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CLOCKO15516 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLOCKO15516 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLOCKO15516 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CLOCKO15516 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLOCKO15516 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLOCKO15516 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.82■□□□□ 0.28
CLOCKO15516 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CLOCKO15516 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLOCKO15516 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
CLOCKO15516 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.82■□□□□ 0.28
CLOCKO15516 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.82■□□□□ 0.28
CLOCKO15516 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLOCKO15516 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CLOCKO15516 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLOCKO15516 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.82■□□□□ 0.28
CLOCKO15516 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLOCKO15516 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLOCKO15516 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLOCKO15516 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CLOCKO15516 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLOCKO15516 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.82■□□□□ 0.28
CLOCKO15516 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.82■□□□□ 0.28
CLOCKO15516 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.82■□□□□ 0.28
CLOCKO15516 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLOCKO15516 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.82■□□□□ 0.28
CLOCKO15516 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
CLOCKO15516 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.82■□□□□ 0.28
CLOCKO15516 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
CLOCKO15516 CRYGFP-201ENST00000418459 633 ntBASIC16.82■□□□□ 0.28
CLOCKO15516 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.82■□□□□ 0.28
CLOCKO15516 SLC25A1P4-201ENST00000567977 778 ntBASIC16.82■□□□□ 0.28
CLOCKO15516 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CLOCKO15516 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.82■□□□□ 0.28
CLOCKO15516 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.82■□□□□ 0.28
CLOCKO15516 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLOCKO15516 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLOCKO15516 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CLOCKO15516 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLOCKO15516 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLOCKO15516 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.82■□□□□ 0.28
CLOCKO15516 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CLOCKO15516 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLOCKO15516 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLOCKO15516 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLOCKO15516 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.82■□□□□ 0.28
CLOCKO15516 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLOCKO15516 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CLOCKO15516 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.81■□□□□ 0.28
CLOCKO15516 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLOCKO15516 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLOCKO15516 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CLOCKO15516 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.81■□□□□ 0.28
CLOCKO15516 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLOCKO15516 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLOCKO15516 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CLOCKO15516 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLOCKO15516 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLOCKO15516 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLOCKO15516 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.81■□□□□ 0.28
CLOCKO15516 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLOCKO15516 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLOCKO15516 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.81■□□□□ 0.28
CLOCKO15516 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLOCKO15516 AC097488.1-201ENST00000507834 756 ntBASIC16.81■□□□□ 0.28
CLOCKO15516 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CLOCKO15516 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.81■□□□□ 0.28
CLOCKO15516 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.81■□□□□ 0.28
CLOCKO15516 C2orf69P3-201ENST00000565542 1120 ntBASIC16.81■□□□□ 0.28
CLOCKO15516 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.81■□□□□ 0.28
CLOCKO15516 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.81■□□□□ 0.28
CLOCKO15516 DGCR10-201ENST00000609839 495 ntBASIC16.81■□□□□ 0.28
CLOCKO15516 AC010947.1-201ENST00000623454 693 ntBASIC16.81■□□□□ 0.28
CLOCKO15516 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLOCKO15516 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLOCKO15516 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.81■□□□□ 0.28
CLOCKO15516 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CLOCKO15516 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLOCKO15516 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CLOCKO15516 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLOCKO15516 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms