Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN9O14815 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN9O14815 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
CAPN9O14815 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN9O14815 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN9O14815 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.7■□□□□ 0.58
CAPN9O14815 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN9O14815 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN9O14815 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
CAPN9O14815 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN9O14815 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN9O14815 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN9O14815 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CAPN9O14815 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CAPN9O14815 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CAPN9O14815 AL845331.1-201ENST00000424978 1190 ntBASIC18.69■□□□□ 0.58
CAPN9O14815 MINOS1P3-201ENST00000457048 203 ntBASIC18.69■□□□□ 0.58
CAPN9O14815 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN9O14815 AC074051.2-201ENST00000565115 352 ntBASIC18.69■□□□□ 0.58
CAPN9O14815 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CAPN9O14815 AL353801.3-201ENST00000609898 542 ntBASIC18.69■□□□□ 0.58
CAPN9O14815 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.69■□□□□ 0.58
CAPN9O14815 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CAPN9O14815 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.69■□□□□ 0.58
CAPN9O14815 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.69■□□□□ 0.58
CAPN9O14815 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN9O14815 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN9O14815 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.69■□□□□ 0.58
CAPN9O14815 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CAPN9O14815 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CAPN9O14815 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN9O14815 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.69■□□□□ 0.58
CAPN9O14815 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN9O14815 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.69■□□□□ 0.58
CAPN9O14815 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.68■□□□□ 0.58
CAPN9O14815 KRT8P47-201ENST00000604727 1398 ntBASIC18.68■□□□□ 0.58
CAPN9O14815 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN9O14815 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN9O14815 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN9O14815 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN9O14815 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN9O14815 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN9O14815 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN9O14815 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN9O14815 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
CAPN9O14815 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CAPN9O14815 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN9O14815 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN9O14815 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN9O14815 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN9O14815 KRT17P6-201ENST00000453795 1220 ntBASIC18.68■□□□□ 0.58
CAPN9O14815 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN9O14815 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.68■□□□□ 0.58
CAPN9O14815 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.68■□□□□ 0.58
CAPN9O14815 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.68■□□□□ 0.58
CAPN9O14815 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.68■□□□□ 0.58
CAPN9O14815 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN9O14815 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN9O14815 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN9O14815 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN9O14815 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN9O14815 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.68■□□□□ 0.58
CAPN9O14815 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.68■□□□□ 0.58
CAPN9O14815 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CAPN9O14815 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN9O14815 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CAPN9O14815 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.68■□□□□ 0.58
CAPN9O14815 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.68■□□□□ 0.58
CAPN9O14815 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN9O14815 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN9O14815 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CAPN9O14815 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN9O14815 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.67■□□□□ 0.58
CAPN9O14815 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.67■□□□□ 0.58
CAPN9O14815 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN9O14815 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CAPN9O14815 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.67■□□□□ 0.58
CAPN9O14815 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CAPN9O14815 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN9O14815 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
CAPN9O14815 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN9O14815 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN9O14815 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN9O14815 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CAPN9O14815 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CAPN9O14815 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.67■□□□□ 0.58
CAPN9O14815 AC091607.1-201ENST00000490318 1060 ntBASIC18.67■□□□□ 0.58
CAPN9O14815 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.67■□□□□ 0.58
CAPN9O14815 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN9O14815 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN9O14815 AC012615.1-201ENST00000565797 1299 ntBASIC18.67■□□□□ 0.58
CAPN9O14815 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.67■□□□□ 0.58
CAPN9O14815 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.67■□□□□ 0.58
CAPN9O14815 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.67■□□□□ 0.58
CAPN9O14815 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN9O14815 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.67■□□□□ 0.58
CAPN9O14815 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN9O14815 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN9O14815 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.67■□□□□ 0.58
CAPN9O14815 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms