Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC22.16■■□□□ 1.14
RTCBQ9Y3I0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTCBQ9Y3I0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTCBQ9Y3I0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTCBQ9Y3I0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTCBQ9Y3I0 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 DUT-210ENST00000559935 569 ntTSL 3 BASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 AC092919.2-201ENST00000623631 1645 ntBASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 AC100803.2-201ENST00000562459 1963 ntBASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 AL096828.2-201ENST00000567259 1965 ntBASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 AC006116.8-202ENST00000587620 1550 ntBASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 AC073592.3-201ENST00000625118 1834 ntBASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTCBQ9Y3I0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC22.14■■□□□ 1.14
RTCBQ9Y3I0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC22.14■■□□□ 1.14
RTCBQ9Y3I0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
RTCBQ9Y3I0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RTCBQ9Y3I0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RTCBQ9Y3I0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC22.14■■□□□ 1.13
RTCBQ9Y3I0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
RTCBQ9Y3I0 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
RTCBQ9Y3I0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RTCBQ9Y3I0 FAM185BP-201ENST00000443595 716 ntBASIC22.14■■□□□ 1.13
RTCBQ9Y3I0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
RTCBQ9Y3I0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RTCBQ9Y3I0 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RTCBQ9Y3I0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC22.14■■□□□ 1.13
RTCBQ9Y3I0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC22.14■■□□□ 1.13
RTCBQ9Y3I0 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RTCBQ9Y3I0 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC22.14■■□□□ 1.13
RTCBQ9Y3I0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
RTCBQ9Y3I0 AC009949.1-201ENST00000623048 1830 ntBASIC22.14■■□□□ 1.13
RTCBQ9Y3I0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC22.14■■□□□ 1.13
RTCBQ9Y3I0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC22.14■■□□□ 1.13
RTCBQ9Y3I0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC22.14■■□□□ 1.13
RTCBQ9Y3I0 EFTUD1P1-204ENST00000560401 1798 ntBASIC22.14■■□□□ 1.13
RTCBQ9Y3I0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
RTCBQ9Y3I0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RTCBQ9Y3I0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC22.14■■□□□ 1.13
RTCBQ9Y3I0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RTCBQ9Y3I0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RTCBQ9Y3I0 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC22.13■■□□□ 1.13
RTCBQ9Y3I0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RTCBQ9Y3I0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RTCBQ9Y3I0 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RTCBQ9Y3I0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTCBQ9Y3I0 AC112191.1-201ENST00000523689 701 ntBASIC22.13■■□□□ 1.13
RTCBQ9Y3I0 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC22.13■■□□□ 1.13
RTCBQ9Y3I0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC22.13■■□□□ 1.13
RTCBQ9Y3I0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC22.13■■□□□ 1.13
RTCBQ9Y3I0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RTCBQ9Y3I0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTCBQ9Y3I0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTCBQ9Y3I0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTCBQ9Y3I0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTCBQ9Y3I0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
RTCBQ9Y3I0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTCBQ9Y3I0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTCBQ9Y3I0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTCBQ9Y3I0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
RTCBQ9Y3I0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTCBQ9Y3I0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC22.12■■□□□ 1.13
RTCBQ9Y3I0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTCBQ9Y3I0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTCBQ9Y3I0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTCBQ9Y3I0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC22.12■■□□□ 1.13
RTCBQ9Y3I0 AL590787.1-201ENST00000568856 1315 ntBASIC22.12■■□□□ 1.13
RTCBQ9Y3I0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
RTCBQ9Y3I0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
RTCBQ9Y3I0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTCBQ9Y3I0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTCBQ9Y3I0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTCBQ9Y3I0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RTCBQ9Y3I0 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms