Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.98■□□□□ 0.47
LRRC40Q9H9A6 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
LRRC40Q9H9A6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.98■□□□□ 0.47
LRRC40Q9H9A6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC40Q9H9A6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.98■□□□□ 0.47
LRRC40Q9H9A6 AC096633.1-201ENST00000422446 749 ntBASIC17.98■□□□□ 0.47
LRRC40Q9H9A6 TSPY22P-201ENST00000427496 604 ntBASIC17.98■□□□□ 0.47
LRRC40Q9H9A6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC40Q9H9A6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
LRRC40Q9H9A6 KRT18P21-201ENST00000515767 1272 ntBASIC17.98■□□□□ 0.47
LRRC40Q9H9A6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC40Q9H9A6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC40Q9H9A6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC40Q9H9A6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.98■□□□□ 0.47
LRRC40Q9H9A6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
LRRC40Q9H9A6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
LRRC40Q9H9A6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
LRRC40Q9H9A6 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC40Q9H9A6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC40Q9H9A6 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 AC011498.5-201ENST00000592027 486 ntBASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC40Q9H9A6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC40Q9H9A6 AC097374.2-201ENST00000618617 1306 ntBASIC17.96■□□□□ 0.46
LRRC40Q9H9A6 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
LRRC40Q9H9A6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
LRRC40Q9H9A6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC40Q9H9A6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms