Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rab28Q99KL7 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab28Q99KL7 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rab28Q99KL7 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab28Q99KL7 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab28Q99KL7 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab28Q99KL7 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab28Q99KL7 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab28Q99KL7 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab28Q99KL7 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab28Q99KL7 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab28Q99KL7 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab28Q99KL7 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
Rab28Q99KL7 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab28Q99KL7 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rab28Q99KL7 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab28Q99KL7 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.24□□□□□ -0.13
Rab28Q99KL7 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.24□□□□□ -0.13
Rab28Q99KL7 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Rab28Q99KL7 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Gm43125-201ENSMUST00000201724 730 ntBASIC14.24□□□□□ -0.13
Rab28Q99KL7 Gm45098-201ENSMUST00000207179 657 ntBASIC14.24□□□□□ -0.13
Rab28Q99KL7 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.24□□□□□ -0.13
Rab28Q99KL7 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab28Q99KL7 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rab28Q99KL7 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rab28Q99KL7 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab28Q99KL7 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab28Q99KL7 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab28Q99KL7 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab28Q99KL7 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rab28Q99KL7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab28Q99KL7 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab28Q99KL7 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rab28Q99KL7 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab28Q99KL7 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab28Q99KL7 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rab28Q99KL7 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab28Q99KL7 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.23□□□□□ -0.13
Rab28Q99KL7 Olfr286-202ENSMUST00000205305 969 ntBASIC14.23□□□□□ -0.13
Rab28Q99KL7 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.23□□□□□ -0.13
Rab28Q99KL7 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.23□□□□□ -0.13
Rab28Q99KL7 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab28Q99KL7 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab28Q99KL7 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab28Q99KL7 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab28Q99KL7 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab28Q99KL7 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab28Q99KL7 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab28Q99KL7 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab28Q99KL7 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rab28Q99KL7 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab28Q99KL7 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rab28Q99KL7 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab28Q99KL7 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab28Q99KL7 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab28Q99KL7 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab28Q99KL7 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab28Q99KL7 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab28Q99KL7 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rab28Q99KL7 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab28Q99KL7 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab28Q99KL7 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rab28Q99KL7 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab28Q99KL7 Gm25287-201ENSMUST00000103846 110 ntBASIC14.22□□□□□ -0.13
Rab28Q99KL7 Gm22918-201ENSMUST00000103855 110 ntBASIC14.22□□□□□ -0.13
Rab28Q99KL7 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.22□□□□□ -0.13
Rab28Q99KL7 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.22□□□□□ -0.13
Rab28Q99KL7 Gm38225-201ENSMUST00000194001 393 ntBASIC14.22□□□□□ -0.13
Rab28Q99KL7 Gm43474-201ENSMUST00000196415 774 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms