Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SEMA3CQ99985 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SEMA3CQ99985 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SEMA3CQ99985 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SEMA3CQ99985 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.97■□□□□ 0.47
SEMA3CQ99985 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.97■□□□□ 0.47
SEMA3CQ99985 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.97■□□□□ 0.47
SEMA3CQ99985 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.97■□□□□ 0.47
SEMA3CQ99985 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SEMA3CQ99985 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.96■□□□□ 0.47
SEMA3CQ99985 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SEMA3CQ99985 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SEMA3CQ99985 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SEMA3CQ99985 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SEMA3CQ99985 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.96■□□□□ 0.47
SEMA3CQ99985 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SEMA3CQ99985 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SEMA3CQ99985 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.96■□□□□ 0.47
SEMA3CQ99985 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SEMA3CQ99985 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
SEMA3CQ99985 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
SEMA3CQ99985 COX5BP2-201ENST00000392354 334 ntBASIC17.96■□□□□ 0.47
SEMA3CQ99985 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.96■□□□□ 0.47
SEMA3CQ99985 AC096582.2-201ENST00000510860 516 ntBASIC17.96■□□□□ 0.47
SEMA3CQ99985 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.96■□□□□ 0.47
SEMA3CQ99985 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.96■□□□□ 0.47
SEMA3CQ99985 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SEMA3CQ99985 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.96■□□□□ 0.47
SEMA3CQ99985 AC099336.1-202ENST00000602961 463 ntBASIC17.96■□□□□ 0.47
SEMA3CQ99985 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SEMA3CQ99985 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.96■□□□□ 0.47
SEMA3CQ99985 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SEMA3CQ99985 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SEMA3CQ99985 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SEMA3CQ99985 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SEMA3CQ99985 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SEMA3CQ99985 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SEMA3CQ99985 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SEMA3CQ99985 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
SEMA3CQ99985 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.96■□□□□ 0.46
SEMA3CQ99985 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SEMA3CQ99985 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SEMA3CQ99985 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
SEMA3CQ99985 TP73-AS1-210ENST00000637775 1455 ntBASIC17.95■□□□□ 0.46
SEMA3CQ99985 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SEMA3CQ99985 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.95■□□□□ 0.46
SEMA3CQ99985 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SEMA3CQ99985 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.95■□□□□ 0.46
SEMA3CQ99985 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.95■□□□□ 0.46
SEMA3CQ99985 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.95■□□□□ 0.46
SEMA3CQ99985 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SEMA3CQ99985 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SEMA3CQ99985 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SEMA3CQ99985 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SEMA3CQ99985 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SEMA3CQ99985 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SEMA3CQ99985 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SEMA3CQ99985 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.95■□□□□ 0.46
SEMA3CQ99985 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.95■□□□□ 0.46
SEMA3CQ99985 MIR3652-201ENST00000579335 131 ntBASIC17.95■□□□□ 0.46
SEMA3CQ99985 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.95■□□□□ 0.46
SEMA3CQ99985 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.95■□□□□ 0.46
SEMA3CQ99985 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SEMA3CQ99985 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
SEMA3CQ99985 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SEMA3CQ99985 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SEMA3CQ99985 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SEMA3CQ99985 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SEMA3CQ99985 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SEMA3CQ99985 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SEMA3CQ99985 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
SEMA3CQ99985 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.94■□□□□ 0.46
SEMA3CQ99985 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA3CQ99985 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SEMA3CQ99985 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA3CQ99985 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SEMA3CQ99985 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.94■□□□□ 0.46
SEMA3CQ99985 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA3CQ99985 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.94■□□□□ 0.46
SEMA3CQ99985 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA3CQ99985 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA3CQ99985 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.94■□□□□ 0.46
SEMA3CQ99985 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA3CQ99985 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.94■□□□□ 0.46
SEMA3CQ99985 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.94■□□□□ 0.46
SEMA3CQ99985 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.94■□□□□ 0.46
SEMA3CQ99985 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA3CQ99985 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.94■□□□□ 0.46
SEMA3CQ99985 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.94■□□□□ 0.46
SEMA3CQ99985 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA3CQ99985 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA3CQ99985 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
SEMA3CQ99985 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA3CQ99985 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA3CQ99985 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.94■□□□□ 0.46
SEMA3CQ99985 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.94■□□□□ 0.46
SEMA3CQ99985 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA3CQ99985 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA3CQ99985 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.94■□□□□ 0.46
SEMA3CQ99985 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms