Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.92■□□□□ 0.14
PTP4A1Q93096 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A1Q93096 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PTP4A1Q93096 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A1Q93096 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A1Q93096 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PTP4A1Q93096 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A1Q93096 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A1Q93096 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A1Q93096 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.92■□□□□ 0.14
PTP4A1Q93096 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A1Q93096 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
PTP4A1Q93096 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A1Q93096 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A1Q93096 BX664615.1-201ENST00000443558 458 ntBASIC15.92■□□□□ 0.14
PTP4A1Q93096 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.92■□□□□ 0.14
PTP4A1Q93096 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.92■□□□□ 0.14
PTP4A1Q93096 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.92■□□□□ 0.14
PTP4A1Q93096 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
PTP4A1Q93096 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.92■□□□□ 0.14
PTP4A1Q93096 AC010203.1-204ENST00000548782 407 ntBASIC15.92■□□□□ 0.14
PTP4A1Q93096 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.92■□□□□ 0.14
PTP4A1Q93096 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.92■□□□□ 0.14
PTP4A1Q93096 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.92■□□□□ 0.14
PTP4A1Q93096 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.92■□□□□ 0.14
PTP4A1Q93096 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.92■□□□□ 0.14
PTP4A1Q93096 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PTP4A1Q93096 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.92■□□□□ 0.14
PTP4A1Q93096 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A1Q93096 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.92■□□□□ 0.14
PTP4A1Q93096 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A1Q93096 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.92■□□□□ 0.14
PTP4A1Q93096 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.92■□□□□ 0.14
PTP4A1Q93096 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PTP4A1Q93096 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A1Q93096 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.92■□□□□ 0.14
PTP4A1Q93096 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A1Q93096 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A1Q93096 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTP4A1Q93096 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
PTP4A1Q93096 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PTP4A1Q93096 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.91■□□□□ 0.14
PTP4A1Q93096 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.91■□□□□ 0.14
PTP4A1Q93096 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A1Q93096 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A1Q93096 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A1Q93096 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A1Q93096 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A1Q93096 TERF1P1-201ENST00000311003 1181 ntBASIC15.91■□□□□ 0.14
PTP4A1Q93096 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PTP4A1Q93096 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.91■□□□□ 0.14
PTP4A1Q93096 AC005521.1-201ENST00000393351 872 ntBASIC15.91■□□□□ 0.14
PTP4A1Q93096 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.91■□□□□ 0.14
PTP4A1Q93096 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.91■□□□□ 0.14
PTP4A1Q93096 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.91■□□□□ 0.14
PTP4A1Q93096 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
PTP4A1Q93096 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.91■□□□□ 0.14
PTP4A1Q93096 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PTP4A1Q93096 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.91■□□□□ 0.14
PTP4A1Q93096 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PTP4A1Q93096 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
PTP4A1Q93096 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A1Q93096 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A1Q93096 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A1Q93096 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PTP4A1Q93096 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A1Q93096 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A1Q93096 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.91■□□□□ 0.14
PTP4A1Q93096 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A1Q93096 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PTP4A1Q93096 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A1Q93096 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A1Q93096 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A1Q93096 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PTP4A1Q93096 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PTP4A1Q93096 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A1Q93096 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A1Q93096 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A1Q93096 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A1Q93096 KRT89P-201ENST00000620027 1478 ntBASIC15.91■□□□□ 0.14
PTP4A1Q93096 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A1Q93096 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.9■□□□□ 0.14
PTP4A1Q93096 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A1Q93096 AL162727.3-201ENST00000635661 2787 ntBASIC15.9■□□□□ 0.14
PTP4A1Q93096 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A1Q93096 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A1Q93096 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A1Q93096 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A1Q93096 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A1Q93096 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.9■□□□□ 0.14
PTP4A1Q93096 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.9■□□□□ 0.14
PTP4A1Q93096 COX11P1-201ENST00000489116 835 ntBASIC15.9■□□□□ 0.14
PTP4A1Q93096 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PTP4A1Q93096 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.9■□□□□ 0.14
PTP4A1Q93096 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.9■□□□□ 0.14
PTP4A1Q93096 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A1Q93096 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A1Q93096 AC024563.2-201ENST00000603282 481 ntBASIC15.9■□□□□ 0.14
PTP4A1Q93096 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
PTP4A1Q93096 AC073508.3-201ENST00000619697 1419 ntBASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms