Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
NUBP1P53384 ARSEP1-201ENST00000420443 635 ntBASIC17.58■□□□□ 0.4
NUBP1P53384 AL671277.1-201ENST00000429656 993 ntBASIC17.58■□□□□ 0.4
NUBP1P53384 MTND2P3-201ENST00000452458 470 ntBASIC17.58■□□□□ 0.4
NUBP1P53384 AC005534.1-201ENST00000455709 742 ntTSL 2 BASIC17.58■□□□□ 0.4
NUBP1P53384 ATOX1-206ENST00000522710 591 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
NUBP1P53384 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.58■□□□□ 0.4
NUBP1P53384 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.58■□□□□ 0.4
NUBP1P53384 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NUBP1P53384 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NUBP1P53384 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC17.58■□□□□ 0.4
NUBP1P53384 AC008507.2-201ENST00000588402 1176 ntBASIC17.58■□□□□ 0.4
NUBP1P53384 AL034374.2-201ENST00000605281 548 ntBASIC17.58■□□□□ 0.4
NUBP1P53384 AL662799.1-202ENST00000614205 422 ntBASIC17.58■□□□□ 0.4
NUBP1P53384 AC097520.1-201ENST00000624435 385 ntBASIC17.58■□□□□ 0.4
NUBP1P53384 AL590396.2-201ENST00000636511 1041 ntBASIC17.58■□□□□ 0.4
NUBP1P53384 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NUBP1P53384 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
NUBP1P53384 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NUBP1P53384 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
NUBP1P53384 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NUBP1P53384 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
NUBP1P53384 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NUBP1P53384 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NUBP1P53384 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NUBP1P53384 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.57■□□□□ 0.4
NUBP1P53384 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUBP1P53384 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NUBP1P53384 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUBP1P53384 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NUBP1P53384 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NUBP1P53384 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUBP1P53384 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUBP1P53384 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUBP1P53384 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUBP1P53384 AC132938.5-201ENST00000624980 1813 ntBASIC17.57■□□□□ 0.4
NUBP1P53384 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUBP1P53384 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC17.57■□□□□ 0.4
NUBP1P53384 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.57■□□□□ 0.4
NUBP1P53384 SPDYE7P-202ENST00000420373 878 ntBASIC17.57■□□□□ 0.4
NUBP1P53384 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC17.57■□□□□ 0.4
NUBP1P53384 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUBP1P53384 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUBP1P53384 AL592309.1-201ENST00000443127 649 ntBASIC17.57■□□□□ 0.4
NUBP1P53384 FAM185BP-201ENST00000443595 716 ntBASIC17.57■□□□□ 0.4
NUBP1P53384 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NUBP1P53384 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUBP1P53384 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NUBP1P53384 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NUBP1P53384 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.57■□□□□ 0.4
NUBP1P53384 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.57■□□□□ 0.4
NUBP1P53384 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NUBP1P53384 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUBP1P53384 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUBP1P53384 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.57■□□□□ 0.4
NUBP1P53384 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUBP1P53384 AC006116.8-202ENST00000587620 1550 ntBASIC17.57■□□□□ 0.4
NUBP1P53384 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUBP1P53384 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NUBP1P53384 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUBP1P53384 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUBP1P53384 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.56■□□□□ 0.4
NUBP1P53384 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.56■□□□□ 0.4
NUBP1P53384 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUBP1P53384 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUBP1P53384 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NUBP1P53384 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.56■□□□□ 0.4
NUBP1P53384 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NUBP1P53384 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUBP1P53384 AL117378.2-201ENST00000622916 1337 ntBASIC17.56■□□□□ 0.4
NUBP1P53384 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUBP1P53384 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NUBP1P53384 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NUBP1P53384 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NUBP1P53384 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.56■□□□□ 0.4
NUBP1P53384 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.56■□□□□ 0.4
NUBP1P53384 KRT18P32-201ENST00000424695 1287 ntBASIC17.56■□□□□ 0.4
NUBP1P53384 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.56■□□□□ 0.4
NUBP1P53384 KRT17P7-201ENST00000451704 1104 ntBASIC17.56■□□□□ 0.4
NUBP1P53384 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC17.56■□□□□ 0.4
NUBP1P53384 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC17.56■□□□□ 0.4
NUBP1P53384 AP002807.1-203ENST00000534517 664 ntTSL 2 BASIC17.56■□□□□ 0.4
NUBP1P53384 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.56■□□□□ 0.4
NUBP1P53384 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.56■□□□□ 0.4
NUBP1P53384 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC17.56■□□□□ 0.4
NUBP1P53384 AC009118.2-201ENST00000613275 655 ntBASIC17.56■□□□□ 0.4
NUBP1P53384 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUBP1P53384 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUBP1P53384 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
NUBP1P53384 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUBP1P53384 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUBP1P53384 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUBP1P53384 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.56■□□□□ 0.4
NUBP1P53384 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.56■□□□□ 0.4
NUBP1P53384 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUBP1P53384 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
NUBP1P53384 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.56■□□□□ 0.4
NUBP1P53384 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.56■□□□□ 0.4
NUBP1P53384 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
NUBP1P53384 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms