Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.42■□□□□ 0.54
MMP13P45452 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP13P45452 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP13P45452 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MMP13P45452 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP13P45452 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MMP13P45452 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
MMP13P45452 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP13P45452 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.42■□□□□ 0.54
MMP13P45452 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.42■□□□□ 0.54
MMP13P45452 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.42■□□□□ 0.54
MMP13P45452 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.42■□□□□ 0.54
MMP13P45452 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP13P45452 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.42■□□□□ 0.54
MMP13P45452 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP13P45452 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP13P45452 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.41■□□□□ 0.54
MMP13P45452 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP13P45452 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP13P45452 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP13P45452 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP13P45452 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MMP13P45452 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
MMP13P45452 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP13P45452 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MMP13P45452 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MMP13P45452 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.41■□□□□ 0.54
MMP13P45452 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MMP13P45452 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.41■□□□□ 0.54
MMP13P45452 RNF126P1-202ENST00000569893 925 ntBASIC18.41■□□□□ 0.54
MMP13P45452 AC005332.3-201ENST00000589904 676 ntBASIC18.41■□□□□ 0.54
MMP13P45452 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
MMP13P45452 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.41■□□□□ 0.54
MMP13P45452 AL445228.2-201ENST00000605589 952 ntBASIC18.41■□□□□ 0.54
MMP13P45452 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP13P45452 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP13P45452 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP13P45452 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP13P45452 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP13P45452 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP13P45452 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP13P45452 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.41■□□□□ 0.54
MMP13P45452 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
MMP13P45452 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP13P45452 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
MMP13P45452 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.41■□□□□ 0.54
MMP13P45452 AC018695.7-201ENST00000624587 2492 ntBASIC18.41■□□□□ 0.54
MMP13P45452 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP13P45452 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.41■□□□□ 0.54
MMP13P45452 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
MMP13P45452 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
MMP13P45452 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP13P45452 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MMP13P45452 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP13P45452 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MMP13P45452 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP13P45452 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP13P45452 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.4■□□□□ 0.54
MMP13P45452 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
MMP13P45452 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP13P45452 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP13P45452 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MMP13P45452 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.4■□□□□ 0.54
MMP13P45452 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP13P45452 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
MMP13P45452 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP13P45452 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP13P45452 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MMP13P45452 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP13P45452 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MMP13P45452 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP13P45452 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP13P45452 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.4■□□□□ 0.54
MMP13P45452 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.4■□□□□ 0.54
MMP13P45452 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MMP13P45452 FAM86EP-206ENST00000510506 987 ntBASIC18.4■□□□□ 0.54
MMP13P45452 AL390719.2-201ENST00000606993 987 ntBASIC18.4■□□□□ 0.54
MMP13P45452 Z83836.1-201ENST00000624605 1642 ntBASIC18.4■□□□□ 0.54
MMP13P45452 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
MMP13P45452 AC005332.1-201ENST00000577698 1310 ntBASIC18.4■□□□□ 0.54
MMP13P45452 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP13P45452 AL353692.3-201ENST00000407031 1396 ntBASIC18.4■□□□□ 0.54
MMP13P45452 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP13P45452 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MMP13P45452 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP13P45452 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP13P45452 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MMP13P45452 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.39■□□□□ 0.54
MMP13P45452 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
MMP13P45452 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
MMP13P45452 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
MMP13P45452 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
MMP13P45452 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP13P45452 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP13P45452 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP13P45452 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.39■□□□□ 0.53
MMP13P45452 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP13P45452 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
MMP13P45452 ARMC10P1-201ENST00000313754 855 ntBASIC18.39■□□□□ 0.53
MMP13P45452 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms