Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC30.64■■■□□ 2.5
TOP2AP11388 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
TOP2AP11388 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
TOP2AP11388 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
TOP2AP11388 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC30.64■■■□□ 2.5
TOP2AP11388 AC140658.5-201ENST00000438532 169 ntBASIC30.64■■■□□ 2.5
TOP2AP11388 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
TOP2AP11388 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC30.64■■■□□ 2.5
TOP2AP11388 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC30.64■■■□□ 2.5
TOP2AP11388 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC30.64■■■□□ 2.5
TOP2AP11388 THTPA-204ENST00000554970 569 ntTSL 4 BASIC30.64■■■□□ 2.5
TOP2AP11388 THTPA-206ENST00000556015 535 ntTSL 3 BASIC30.64■■■□□ 2.5
TOP2AP11388 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC30.64■■■□□ 2.5
TOP2AP11388 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
TOP2AP11388 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC30.64■■■□□ 2.5
TOP2AP11388 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC30.64■■■□□ 2.5
TOP2AP11388 REXO1L11P-201ENST00000620964 1927 ntBASIC30.64■■■□□ 2.5
TOP2AP11388 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC30.64■■■□□ 2.5
TOP2AP11388 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
TOP2AP11388 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.49
TOP2AP11388 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
TOP2AP11388 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
TOP2AP11388 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TOP2AP11388 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC30.63■■■□□ 2.49
TOP2AP11388 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
TOP2AP11388 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC30.63■■■□□ 2.49
TOP2AP11388 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC30.63■■■□□ 2.49
TOP2AP11388 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC30.63■■■□□ 2.49
TOP2AP11388 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC30.63■■■□□ 2.49
TOP2AP11388 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
TOP2AP11388 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TOP2AP11388 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TOP2AP11388 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC30.63■■■□□ 2.49
TOP2AP11388 KRT18P55-202ENST00000578578 1546 ntBASIC30.63■■■□□ 2.49
TOP2AP11388 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
TOP2AP11388 AC046185.3-201ENST00000623228 1824 ntBASIC30.63■■■□□ 2.49
TOP2AP11388 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC30.63■■■□□ 2.49
TOP2AP11388 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
TOP2AP11388 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC30.63■■■□□ 2.49
TOP2AP11388 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TOP2AP11388 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
TOP2AP11388 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TOP2AP11388 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
TOP2AP11388 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC30.63■■■□□ 2.49
TOP2AP11388 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC30.63■■■□□ 2.49
TOP2AP11388 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC30.63■■■□□ 2.49
TOP2AP11388 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC30.63■■■□□ 2.49
TOP2AP11388 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC30.62■■■□□ 2.49
TOP2AP11388 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC30.62■■■□□ 2.49
TOP2AP11388 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
TOP2AP11388 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC30.62■■■□□ 2.49
TOP2AP11388 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC30.62■■■□□ 2.49
TOP2AP11388 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
TOP2AP11388 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
TOP2AP11388 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC30.62■■■□□ 2.49
TOP2AP11388 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
TOP2AP11388 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC30.62■■■□□ 2.49
TOP2AP11388 KRT8P48-201ENST00000515599 1220 ntBASIC30.62■■■□□ 2.49
TOP2AP11388 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
TOP2AP11388 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
TOP2AP11388 LINC00628-201ENST00000628516 1289 ntBASIC30.62■■■□□ 2.49
TOP2AP11388 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
TOP2AP11388 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC30.62■■■□□ 2.49
TOP2AP11388 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC30.62■■■□□ 2.49
TOP2AP11388 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
TOP2AP11388 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
TOP2AP11388 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
TOP2AP11388 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
TOP2AP11388 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
TOP2AP11388 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
TOP2AP11388 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
TOP2AP11388 KLK8-202ENST00000320838 456 ntTSL 5 BASIC30.61■■■□□ 2.49
TOP2AP11388 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
TOP2AP11388 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
TOP2AP11388 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
TOP2AP11388 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
TOP2AP11388 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC30.61■■■□□ 2.49
TOP2AP11388 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC30.61■■■□□ 2.49
TOP2AP11388 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
TOP2AP11388 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC30.6■■■□□ 2.49
TOP2AP11388 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
TOP2AP11388 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC30.6■■■□□ 2.49
TOP2AP11388 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
TOP2AP11388 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
TOP2AP11388 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC30.6■■■□□ 2.49
TOP2AP11388 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC30.6■■■□□ 2.49
TOP2AP11388 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC30.6■■■□□ 2.49
TOP2AP11388 TK1-204ENST00000590430 683 ntTSL 3 BASIC30.6■■■□□ 2.49
TOP2AP11388 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC30.6■■■□□ 2.49
TOP2AP11388 AL020996.1-203ENST00000536896 2307 ntBASIC30.6■■■□□ 2.49
TOP2AP11388 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
TOP2AP11388 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
TOP2AP11388 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
TOP2AP11388 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC30.6■■■□□ 2.49
TOP2AP11388 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC30.59■■■□□ 2.49
TOP2AP11388 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC30.59■■■□□ 2.49
TOP2AP11388 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
TOP2AP11388 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC30.59■■■□□ 2.49
TOP2AP11388 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
TOP2AP11388 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms