Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ACTN4O43707 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ACTN4O43707 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.85■□□□□ 0.77
ACTN4O43707 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ACTN4O43707 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.85■□□□□ 0.77
ACTN4O43707 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ACTN4O43707 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.85■□□□□ 0.77
ACTN4O43707 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ACTN4O43707 HTR7P1-202ENST00000624664 4411 ntBASIC19.85■□□□□ 0.77
ACTN4O43707 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ACTN4O43707 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ACTN4O43707 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ACTN4O43707 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
ACTN4O43707 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
ACTN4O43707 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ACTN4O43707 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ACTN4O43707 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
ACTN4O43707 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.85■□□□□ 0.77
ACTN4O43707 AC010460.3-201ENST00000511359 1579 ntBASIC19.85■□□□□ 0.77
ACTN4O43707 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ACTN4O43707 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ACTN4O43707 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ACTN4O43707 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ACTN4O43707 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ACTN4O43707 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
ACTN4O43707 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ACTN4O43707 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ACTN4O43707 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ACTN4O43707 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
ACTN4O43707 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACTN4O43707 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.84■□□□□ 0.77
ACTN4O43707 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ACTN4O43707 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACTN4O43707 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ACTN4O43707 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ACTN4O43707 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACTN4O43707 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.84■□□□□ 0.77
ACTN4O43707 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.84■□□□□ 0.77
ACTN4O43707 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ACTN4O43707 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACTN4O43707 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACTN4O43707 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACTN4O43707 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
ACTN4O43707 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
ACTN4O43707 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
ACTN4O43707 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACTN4O43707 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ACTN4O43707 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACTN4O43707 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACTN4O43707 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.84■□□□□ 0.77
ACTN4O43707 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.84■□□□□ 0.77
ACTN4O43707 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.84■□□□□ 0.77
ACTN4O43707 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ACTN4O43707 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.84■□□□□ 0.77
ACTN4O43707 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ACTN4O43707 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ACTN4O43707 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ACTN4O43707 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACTN4O43707 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACTN4O43707 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACTN4O43707 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ACTN4O43707 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACTN4O43707 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.84■□□□□ 0.77
ACTN4O43707 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.84■□□□□ 0.77
ACTN4O43707 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ACTN4O43707 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ACTN4O43707 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ACTN4O43707 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
ACTN4O43707 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
ACTN4O43707 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.83■□□□□ 0.77
ACTN4O43707 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
ACTN4O43707 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ACTN4O43707 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ACTN4O43707 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ACTN4O43707 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ACTN4O43707 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.83■□□□□ 0.77
ACTN4O43707 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
ACTN4O43707 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.83■□□□□ 0.77
ACTN4O43707 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ACTN4O43707 AL671277.2-201ENST00000458060 996 ntBASIC19.83■□□□□ 0.77
ACTN4O43707 DUX4L26-201ENST00000489078 1255 ntBASIC19.83■□□□□ 0.77
ACTN4O43707 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.83■□□□□ 0.77
ACTN4O43707 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ACTN4O43707 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ACTN4O43707 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.83■□□□□ 0.77
ACTN4O43707 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ACTN4O43707 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.83■□□□□ 0.77
ACTN4O43707 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.83■□□□□ 0.77
ACTN4O43707 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ACTN4O43707 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ACTN4O43707 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ACTN4O43707 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ACTN4O43707 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
ACTN4O43707 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.83■□□□□ 0.76
ACTN4O43707 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ACTN4O43707 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ACTN4O43707 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
ACTN4O43707 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.83■□□□□ 0.76
ACTN4O43707 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
ACTN4O43707 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms