Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SEMA3EO15041 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SEMA3EO15041 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC21.24■□□□□ 0.99
SEMA3EO15041 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC21.24■□□□□ 0.99
SEMA3EO15041 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SEMA3EO15041 AL139424.1-201ENST00000607572 797 ntBASIC21.24■□□□□ 0.99
SEMA3EO15041 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SEMA3EO15041 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SEMA3EO15041 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SEMA3EO15041 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC21.24■□□□□ 0.99
SEMA3EO15041 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SEMA3EO15041 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SEMA3EO15041 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SEMA3EO15041 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SEMA3EO15041 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SEMA3EO15041 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.23■□□□□ 0.99
SEMA3EO15041 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SEMA3EO15041 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC21.23■□□□□ 0.99
SEMA3EO15041 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.23■□□□□ 0.99
SEMA3EO15041 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SEMA3EO15041 FABP5-202ENST00000396359 986 ntTSL 5 BASIC21.23■□□□□ 0.99
SEMA3EO15041 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SEMA3EO15041 ELK2BP-201ENST00000415014 1224 ntBASIC21.23■□□□□ 0.99
SEMA3EO15041 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SEMA3EO15041 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
SEMA3EO15041 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SEMA3EO15041 AC140113.2-201ENST00000604370 208 ntBASIC21.23■□□□□ 0.99
SEMA3EO15041 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SEMA3EO15041 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SEMA3EO15041 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SEMA3EO15041 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.23■□□□□ 0.99
SEMA3EO15041 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC21.23■□□□□ 0.99
SEMA3EO15041 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC21.23■□□□□ 0.99
SEMA3EO15041 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SEMA3EO15041 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SEMA3EO15041 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SEMA3EO15041 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SEMA3EO15041 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SEMA3EO15041 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SEMA3EO15041 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC21.22■□□□□ 0.99
SEMA3EO15041 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SEMA3EO15041 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SEMA3EO15041 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SEMA3EO15041 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SEMA3EO15041 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
SEMA3EO15041 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SEMA3EO15041 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC21.22■□□□□ 0.99
SEMA3EO15041 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SEMA3EO15041 PGAM5P1-201ENST00000518923 814 ntBASIC21.22■□□□□ 0.99
SEMA3EO15041 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC21.22■□□□□ 0.99
SEMA3EO15041 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC21.22■□□□□ 0.99
SEMA3EO15041 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SEMA3EO15041 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
SEMA3EO15041 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.22■□□□□ 0.99
SEMA3EO15041 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.22■□□□□ 0.99
SEMA3EO15041 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.22■□□□□ 0.99
SEMA3EO15041 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SEMA3EO15041 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SEMA3EO15041 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SEMA3EO15041 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SEMA3EO15041 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SEMA3EO15041 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.21■□□□□ 0.99
SEMA3EO15041 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
SEMA3EO15041 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SEMA3EO15041 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SEMA3EO15041 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.21■□□□□ 0.99
SEMA3EO15041 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.21■□□□□ 0.99
SEMA3EO15041 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SEMA3EO15041 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.21■□□□□ 0.99
SEMA3EO15041 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SEMA3EO15041 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SEMA3EO15041 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SEMA3EO15041 MED15P5-201ENST00000423150 992 ntBASIC21.21■□□□□ 0.99
SEMA3EO15041 SLC25A6P5-201ENST00000435663 894 ntBASIC21.21■□□□□ 0.99
SEMA3EO15041 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC21.21■□□□□ 0.99
SEMA3EO15041 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC21.21■□□□□ 0.99
SEMA3EO15041 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SEMA3EO15041 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC21.21■□□□□ 0.99
SEMA3EO15041 AC006504.4-201ENST00000592118 1568 ntBASIC21.21■□□□□ 0.99
SEMA3EO15041 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SEMA3EO15041 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.21■□□□□ 0.99
SEMA3EO15041 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SEMA3EO15041 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.21■□□□□ 0.99
SEMA3EO15041 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SEMA3EO15041 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SEMA3EO15041 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.99
SEMA3EO15041 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SEMA3EO15041 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
SEMA3EO15041 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC21.2■□□□□ 0.98
SEMA3EO15041 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SEMA3EO15041 SLC4A1APP2-201ENST00000424054 1259 ntBASIC21.2■□□□□ 0.98
SEMA3EO15041 RPP21-221ENST00000428040 594 ntTSL 2 BASIC21.2■□□□□ 0.98
SEMA3EO15041 COX10-202ENST00000429152 875 ntTSL 2 BASIC21.2■□□□□ 0.98
SEMA3EO15041 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC21.2■□□□□ 0.98
SEMA3EO15041 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SEMA3EO15041 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC21.2■□□□□ 0.98
SEMA3EO15041 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SEMA3EO15041 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC21.2■□□□□ 0.98
SEMA3EO15041 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC21.2■□□□□ 0.98
SEMA3EO15041 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms