Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
COL17A1Q9UMD9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC26.61■■□□□ 1.85
COL17A1Q9UMD9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL17A1Q9UMD9 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC26.61■■□□□ 1.85
COL17A1Q9UMD9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL17A1Q9UMD9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL17A1Q9UMD9 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
COL17A1Q9UMD9 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL17A1Q9UMD9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC26.61■■□□□ 1.85
COL17A1Q9UMD9 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL17A1Q9UMD9 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL17A1Q9UMD9 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC26.61■■□□□ 1.85
COL17A1Q9UMD9 SLC25A6P5-201ENST00000435663 894 ntBASIC26.61■■□□□ 1.85
COL17A1Q9UMD9 RBPMS2P1-201ENST00000437762 623 ntBASIC26.61■■□□□ 1.85
COL17A1Q9UMD9 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC26.61■■□□□ 1.85
COL17A1Q9UMD9 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
COL17A1Q9UMD9 AC026150.2-201ENST00000564693 1156 ntBASIC26.61■■□□□ 1.85
COL17A1Q9UMD9 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
COL17A1Q9UMD9 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC26.61■■□□□ 1.85
COL17A1Q9UMD9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
COL17A1Q9UMD9 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC26.6■■□□□ 1.85
COL17A1Q9UMD9 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL17A1Q9UMD9 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
COL17A1Q9UMD9 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL17A1Q9UMD9 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL17A1Q9UMD9 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
COL17A1Q9UMD9 PPP6R2P1-201ENST00000450880 1275 ntBASIC26.6■■□□□ 1.85
COL17A1Q9UMD9 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
COL17A1Q9UMD9 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
COL17A1Q9UMD9 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC26.6■■□□□ 1.85
COL17A1Q9UMD9 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC26.6■■□□□ 1.85
COL17A1Q9UMD9 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL17A1Q9UMD9 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC26.59■■□□□ 1.85
COL17A1Q9UMD9 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
COL17A1Q9UMD9 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
COL17A1Q9UMD9 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
COL17A1Q9UMD9 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC26.59■■□□□ 1.85
COL17A1Q9UMD9 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
COL17A1Q9UMD9 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
COL17A1Q9UMD9 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
COL17A1Q9UMD9 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
COL17A1Q9UMD9 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC26.59■■□□□ 1.85
COL17A1Q9UMD9 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC26.59■■□□□ 1.85
COL17A1Q9UMD9 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
COL17A1Q9UMD9 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC26.59■■□□□ 1.85
COL17A1Q9UMD9 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC26.59■■□□□ 1.85
COL17A1Q9UMD9 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC26.59■■□□□ 1.85
COL17A1Q9UMD9 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC26.59■■□□□ 1.85
COL17A1Q9UMD9 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
COL17A1Q9UMD9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC26.59■■□□□ 1.85
COL17A1Q9UMD9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC26.59■■□□□ 1.85
COL17A1Q9UMD9 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
COL17A1Q9UMD9 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC26.59■■□□□ 1.85
COL17A1Q9UMD9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
COL17A1Q9UMD9 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC26.58■■□□□ 1.85
COL17A1Q9UMD9 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
COL17A1Q9UMD9 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC26.58■■□□□ 1.85
COL17A1Q9UMD9 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
COL17A1Q9UMD9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
COL17A1Q9UMD9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
COL17A1Q9UMD9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
COL17A1Q9UMD9 AC079776.1-201ENST00000401540 1152 ntBASIC26.58■■□□□ 1.85
COL17A1Q9UMD9 GPR53P-205ENST00000457298 1084 ntBASIC26.58■■□□□ 1.85
COL17A1Q9UMD9 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC26.58■■□□□ 1.85
COL17A1Q9UMD9 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
COL17A1Q9UMD9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC26.58■■□□□ 1.85
COL17A1Q9UMD9 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
COL17A1Q9UMD9 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC26.58■■□□□ 1.85
COL17A1Q9UMD9 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC26.58■■□□□ 1.84
COL17A1Q9UMD9 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC26.58■■□□□ 1.84
COL17A1Q9UMD9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.84
COL17A1Q9UMD9 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
COL17A1Q9UMD9 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
COL17A1Q9UMD9 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
COL17A1Q9UMD9 TMPRSS11CP-201ENST00000453277 683 ntBASIC26.57■■□□□ 1.84
COL17A1Q9UMD9 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC26.57■■□□□ 1.84
COL17A1Q9UMD9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
COL17A1Q9UMD9 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
COL17A1Q9UMD9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
COL17A1Q9UMD9 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC26.57■■□□□ 1.84
COL17A1Q9UMD9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
COL17A1Q9UMD9 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL17A1Q9UMD9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC26.56■■□□□ 1.84
COL17A1Q9UMD9 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC26.56■■□□□ 1.84
COL17A1Q9UMD9 AL513480.1-201ENST00000451731 511 ntBASIC26.56■■□□□ 1.84
COL17A1Q9UMD9 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC26.56■■□□□ 1.84
COL17A1Q9UMD9 FAM86C2P-203ENST00000528684 1004 ntBASIC26.56■■□□□ 1.84
COL17A1Q9UMD9 AL135744.1-201ENST00000565098 629 ntBASIC26.56■■□□□ 1.84
COL17A1Q9UMD9 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC26.56■■□□□ 1.84
COL17A1Q9UMD9 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
COL17A1Q9UMD9 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC26.56■■□□□ 1.84
COL17A1Q9UMD9 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC26.56■■□□□ 1.84
COL17A1Q9UMD9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
COL17A1Q9UMD9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL17A1Q9UMD9 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL17A1Q9UMD9 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
COL17A1Q9UMD9 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC26.55■■□□□ 1.84
COL17A1Q9UMD9 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
COL17A1Q9UMD9 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC26.55■■□□□ 1.84
COL17A1Q9UMD9 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC26.55■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms