Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.62■□□□□ 0.57
CHD7Q9P2D1 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.62■□□□□ 0.57
CHD7Q9P2D1 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHD7Q9P2D1 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHD7Q9P2D1 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CHD7Q9P2D1 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHD7Q9P2D1 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CHD7Q9P2D1 MIR943-201ENST00000401286 94 ntBASIC18.62■□□□□ 0.57
CHD7Q9P2D1 KRT8P48-201ENST00000515599 1220 ntBASIC18.62■□□□□ 0.57
CHD7Q9P2D1 AL353135.1-201ENST00000606729 504 ntBASIC18.62■□□□□ 0.57
CHD7Q9P2D1 MIR6752-201ENST00000618442 71 ntBASIC18.62■□□□□ 0.57
CHD7Q9P2D1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHD7Q9P2D1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHD7Q9P2D1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHD7Q9P2D1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHD7Q9P2D1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHD7Q9P2D1 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHD7Q9P2D1 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.62■□□□□ 0.57
CHD7Q9P2D1 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.62■□□□□ 0.57
CHD7Q9P2D1 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.62■□□□□ 0.57
CHD7Q9P2D1 AC116562.4-201ENST00000641316 2276 ntBASIC18.62■□□□□ 0.57
CHD7Q9P2D1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.62■□□□□ 0.57
CHD7Q9P2D1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHD7Q9P2D1 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHD7Q9P2D1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.62■□□□□ 0.57
CHD7Q9P2D1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.61■□□□□ 0.57
CHD7Q9P2D1 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHD7Q9P2D1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHD7Q9P2D1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHD7Q9P2D1 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHD7Q9P2D1 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHD7Q9P2D1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHD7Q9P2D1 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHD7Q9P2D1 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHD7Q9P2D1 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.61■□□□□ 0.57
CHD7Q9P2D1 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHD7Q9P2D1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHD7Q9P2D1 AC008677.1-201ENST00000519230 1561 ntBASIC18.61■□□□□ 0.57
CHD7Q9P2D1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.61■□□□□ 0.57
CHD7Q9P2D1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHD7Q9P2D1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHD7Q9P2D1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHD7Q9P2D1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHD7Q9P2D1 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CHD7Q9P2D1 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.61■□□□□ 0.57
CHD7Q9P2D1 FAM185BP-201ENST00000443595 716 ntBASIC18.61■□□□□ 0.57
CHD7Q9P2D1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.61■□□□□ 0.57
CHD7Q9P2D1 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.61■□□□□ 0.57
CHD7Q9P2D1 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHD7Q9P2D1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.61■□□□□ 0.57
CHD7Q9P2D1 ACTL9-202ENST00000612068 1252 ntBASIC18.61■□□□□ 0.57
CHD7Q9P2D1 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CHD7Q9P2D1 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.61■□□□□ 0.57
CHD7Q9P2D1 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHD7Q9P2D1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHD7Q9P2D1 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD7Q9P2D1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD7Q9P2D1 COX5BP2-201ENST00000392354 334 ntBASIC18.6■□□□□ 0.57
CHD7Q9P2D1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.6■□□□□ 0.57
CHD7Q9P2D1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.6■□□□□ 0.57
CHD7Q9P2D1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.6■□□□□ 0.57
CHD7Q9P2D1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD7Q9P2D1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.6■□□□□ 0.57
CHD7Q9P2D1 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD7Q9P2D1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD7Q9P2D1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD7Q9P2D1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD7Q9P2D1 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD7Q9P2D1 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHD7Q9P2D1 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD7Q9P2D1 PTCHD3P3-201ENST00000403073 906 ntBASIC18.6■□□□□ 0.57
CHD7Q9P2D1 KRT18P32-201ENST00000424695 1287 ntBASIC18.6■□□□□ 0.57
CHD7Q9P2D1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.6■□□□□ 0.57
CHD7Q9P2D1 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CHD7Q9P2D1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD7Q9P2D1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHD7Q9P2D1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD7Q9P2D1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
CHD7Q9P2D1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD7Q9P2D1 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHD7Q9P2D1 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.6■□□□□ 0.57
CHD7Q9P2D1 AC067863.1-201ENST00000494933 530 ntBASIC18.6■□□□□ 0.57
CHD7Q9P2D1 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.6■□□□□ 0.57
CHD7Q9P2D1 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.6■□□□□ 0.57
CHD7Q9P2D1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CHD7Q9P2D1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CHD7Q9P2D1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD7Q9P2D1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD7Q9P2D1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD7Q9P2D1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD7Q9P2D1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD7Q9P2D1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD7Q9P2D1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CHD7Q9P2D1 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD7Q9P2D1 AC003669.1-201ENST00000334569 611 ntBASIC18.59■□□□□ 0.57
CHD7Q9P2D1 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.59■□□□□ 0.57
CHD7Q9P2D1 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms