Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 HOXB1-202ENST00000577092 1414 ntBASIC19.52■□□□□ 0.72
SPTLC3Q9NUV7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.52■□□□□ 0.72
SPTLC3Q9NUV7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.52■□□□□ 0.72
SPTLC3Q9NUV7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPTLC3Q9NUV7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SPTLC3Q9NUV7 PRORSD1P-201ENST00000295112 541 ntBASIC19.52■□□□□ 0.72
SPTLC3Q9NUV7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SPTLC3Q9NUV7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SPTLC3Q9NUV7 KRT18P29-201ENST00000397031 1267 ntBASIC19.52■□□□□ 0.72
SPTLC3Q9NUV7 RPS2P55-201ENST00000397318 883 ntBASIC19.52■□□□□ 0.72
SPTLC3Q9NUV7 TSPY20P-201ENST00000450910 630 ntBASIC19.52■□□□□ 0.72
SPTLC3Q9NUV7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.52■□□□□ 0.72
SPTLC3Q9NUV7 AC107956.1-201ENST00000494359 873 ntBASIC19.52■□□□□ 0.72
SPTLC3Q9NUV7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SPTLC3Q9NUV7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.52■□□□□ 0.72
SPTLC3Q9NUV7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.72
SPTLC3Q9NUV7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SPTLC3Q9NUV7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPTLC3Q9NUV7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SPTLC3Q9NUV7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPTLC3Q9NUV7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.52■□□□□ 0.72
SPTLC3Q9NUV7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPTLC3Q9NUV7 AC092850.2-201ENST00000623821 2697 ntBASIC19.52■□□□□ 0.72
SPTLC3Q9NUV7 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SPTLC3Q9NUV7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SPTLC3Q9NUV7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SPTLC3Q9NUV7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SPTLC3Q9NUV7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
SPTLC3Q9NUV7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SPTLC3Q9NUV7 CYP2T1P-202ENST00000641596 2535 ntBASIC19.52■□□□□ 0.71
SPTLC3Q9NUV7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
SPTLC3Q9NUV7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
SPTLC3Q9NUV7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
SPTLC3Q9NUV7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.52■□□□□ 0.71
SPTLC3Q9NUV7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 ABHD17AP1-201ENST00000358206 933 ntBASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 BANP-201ENST00000286122 2368 ntTSL 5 BASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.51■□□□□ 0.71
SPTLC3Q9NUV7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 AC116353.5-201ENST00000638148 1699 ntBASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 AC098590.1-201ENST00000468126 897 ntBASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 DUTP2-201ENST00000519164 463 ntBASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 AP003041.3-201ENST00000527151 707 ntBASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 AC142381.4-202ENST00000563973 229 ntBASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 CR769767.2-201ENST00000622735 460 ntBASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.5■□□□□ 0.71
SPTLC3Q9NUV7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms