Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC21.31■■□□□ 1
SALL1Q9NSC2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.31■■□□□ 1
SALL1Q9NSC2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.31■■□□□ 1
SALL1Q9NSC2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.31■■□□□ 1
SALL1Q9NSC2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.31■■□□□ 1
SALL1Q9NSC2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.31■■□□□ 1
SALL1Q9NSC2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SALL1Q9NSC2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SALL1Q9NSC2 AP002414.3-201ENST00000589352 1468 ntBASIC21.31■■□□□ 1
SALL1Q9NSC2 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SALL1Q9NSC2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SALL1Q9NSC2 AC104109.2-201ENST00000602919 1418 ntBASIC21.31■■□□□ 1
SALL1Q9NSC2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.31■■□□□ 1
SALL1Q9NSC2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SALL1Q9NSC2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
SALL1Q9NSC2 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SALL1Q9NSC2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SALL1Q9NSC2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC21.31■■□□□ 1
SALL1Q9NSC2 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.31■■□□□ 1
SALL1Q9NSC2 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
SALL1Q9NSC2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SALL1Q9NSC2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC21.3■■□□□ 1
SALL1Q9NSC2 LBH-204ENST00000406087 559 ntTSL 4 BASIC21.3■■□□□ 1
SALL1Q9NSC2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC21.3■■□□□ 1
SALL1Q9NSC2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC21.3■■□□□ 1
SALL1Q9NSC2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC21.3■■□□□ 1
SALL1Q9NSC2 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC21.3■■□□□ 1
SALL1Q9NSC2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC21.3■■□□□ 1
SALL1Q9NSC2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
SALL1Q9NSC2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.3■■□□□ 1
SALL1Q9NSC2 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.3■■□□□ 1
SALL1Q9NSC2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
SALL1Q9NSC2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SALL1Q9NSC2 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
SALL1Q9NSC2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SALL1Q9NSC2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.3■■□□□ 1
SALL1Q9NSC2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.3■■□□□ 1
SALL1Q9NSC2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.3■■□□□ 1
SALL1Q9NSC2 AC004817.3-201ENST00000602957 2129 ntBASIC21.3■■□□□ 1
SALL1Q9NSC2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.3■■□□□ 1
SALL1Q9NSC2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.3■■□□□ 1
SALL1Q9NSC2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC21.3■■□□□ 1
SALL1Q9NSC2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.3■■□□□ 1
SALL1Q9NSC2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
SALL1Q9NSC2 AC003669.1-201ENST00000334569 611 ntBASIC21.29■■□□□ 1
SALL1Q9NSC2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SALL1Q9NSC2 RNA5SP415-201ENST00000517246 115 ntBASIC21.29■■□□□ 1
SALL1Q9NSC2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC21.29■■□□□ 1
SALL1Q9NSC2 AC006557.2-201ENST00000592985 1240 ntBASIC21.29■■□□□ 1
SALL1Q9NSC2 Z83851.2-201ENST00000609564 659 ntBASIC21.29■■□□□ 1
SALL1Q9NSC2 AL589182.2-201ENST00000619332 1049 ntBASIC21.29■■□□□ 1
SALL1Q9NSC2 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21.29■■□□□ 1
SALL1Q9NSC2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
SALL1Q9NSC2 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.29■■□□□ 1
SALL1Q9NSC2 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SALL1Q9NSC2 AC067852.2-201ENST00000590513 2313 ntBASIC21.29■■□□□ 1
SALL1Q9NSC2 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.29■■□□□ 1
SALL1Q9NSC2 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.29■■□□□ 1
SALL1Q9NSC2 AC148477.5-201ENST00000625164 1645 ntBASIC21.29■■□□□ 1
SALL1Q9NSC2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.29■■□□□ 1
SALL1Q9NSC2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SALL1Q9NSC2 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
SALL1Q9NSC2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.29■■□□□ 1
SALL1Q9NSC2 FLJ13224-201ENST00000313737 1514 ntBASIC21.29■■□□□ 1
SALL1Q9NSC2 KRT18P55-202ENST00000578578 1546 ntBASIC21.29■■□□□ 1
SALL1Q9NSC2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.29■■□□□ 1
SALL1Q9NSC2 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SALL1Q9NSC2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.29■■□□□ 1
SALL1Q9NSC2 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SALL1Q9NSC2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC21.29■■□□□ 1
SALL1Q9NSC2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC21.29■■□□□ 1
SALL1Q9NSC2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC21.29■■□□□ 1
SALL1Q9NSC2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC21.29■■□□□ 1
SALL1Q9NSC2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC21.29■■□□□ 1
SALL1Q9NSC2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC21.29■■□□□ 1
SALL1Q9NSC2 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SALL1Q9NSC2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC21.29■■□□□ 1
SALL1Q9NSC2 AC006538.3-201ENST00000612495 578 ntBASIC21.29■■□□□ 1
SALL1Q9NSC2 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SALL1Q9NSC2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.28■■□□□ 1
SALL1Q9NSC2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.28■■□□□ 1
SALL1Q9NSC2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
SALL1Q9NSC2 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
SALL1Q9NSC2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SALL1Q9NSC2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.28■■□□□ 1
SALL1Q9NSC2 AP000997.3-201ENST00000623333 2250 ntBASIC21.28■■□□□ 1
SALL1Q9NSC2 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SALL1Q9NSC2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SALL1Q9NSC2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC21.28■■□□□ 1
SALL1Q9NSC2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.28■■□□□ 1
SALL1Q9NSC2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC21.28■■□□□ 1
SALL1Q9NSC2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC21.28■■□□□ 1
SALL1Q9NSC2 POLD2P1-201ENST00000511220 997 ntBASIC21.28■■□□□ 1
SALL1Q9NSC2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC21.28■■□□□ 1
SALL1Q9NSC2 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC21.28■■□□□ 1
SALL1Q9NSC2 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC21.28■■□□□ 1
SALL1Q9NSC2 STK25P1-201ENST00000585406 838 ntBASIC21.28■■□□□ 1
SALL1Q9NSC2 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SALL1Q9NSC2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.28■■□□□ 1
SALL1Q9NSC2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms