Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PIF1Q9H611 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PIF1Q9H611 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PIF1Q9H611 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PIF1Q9H611 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.97■□□□□ 0.31
PIF1Q9H611 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PIF1Q9H611 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.97■□□□□ 0.31
PIF1Q9H611 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PIF1Q9H611 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.97■□□□□ 0.31
PIF1Q9H611 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.97■□□□□ 0.31
PIF1Q9H611 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PIF1Q9H611 TSPY7P-201ENST00000431358 1114 ntBASIC16.97■□□□□ 0.31
PIF1Q9H611 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.97■□□□□ 0.31
PIF1Q9H611 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PIF1Q9H611 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PIF1Q9H611 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.97■□□□□ 0.31
PIF1Q9H611 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PIF1Q9H611 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PIF1Q9H611 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PIF1Q9H611 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PIF1Q9H611 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
PIF1Q9H611 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.97■□□□□ 0.31
PIF1Q9H611 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PIF1Q9H611 AC079328.2-201ENST00000561241 3354 ntBASIC16.97■□□□□ 0.31
PIF1Q9H611 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.97■□□□□ 0.31
PIF1Q9H611 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
PIF1Q9H611 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PIF1Q9H611 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PIF1Q9H611 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PIF1Q9H611 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PIF1Q9H611 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PIF1Q9H611 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PIF1Q9H611 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.96■□□□□ 0.31
PIF1Q9H611 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.96■□□□□ 0.31
PIF1Q9H611 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PIF1Q9H611 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.96■□□□□ 0.31
PIF1Q9H611 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.96■□□□□ 0.31
PIF1Q9H611 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
PIF1Q9H611 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PIF1Q9H611 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PIF1Q9H611 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PIF1Q9H611 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PIF1Q9H611 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PIF1Q9H611 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.96■□□□□ 0.31
PIF1Q9H611 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PIF1Q9H611 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.96■□□□□ 0.31
PIF1Q9H611 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PIF1Q9H611 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PIF1Q9H611 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
PIF1Q9H611 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.96■□□□□ 0.31
PIF1Q9H611 AC104390.1-201ENST00000555663 520 ntBASIC16.96■□□□□ 0.31
PIF1Q9H611 AL023803.3-201ENST00000615559 522 ntBASIC16.96■□□□□ 0.31
PIF1Q9H611 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PIF1Q9H611 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PIF1Q9H611 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PIF1Q9H611 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PIF1Q9H611 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PIF1Q9H611 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PIF1Q9H611 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.96■□□□□ 0.31
PIF1Q9H611 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PIF1Q9H611 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PIF1Q9H611 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PIF1Q9H611 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.96■□□□□ 0.3
PIF1Q9H611 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.96■□□□□ 0.3
PIF1Q9H611 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PIF1Q9H611 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PIF1Q9H611 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PIF1Q9H611 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PIF1Q9H611 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
PIF1Q9H611 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PIF1Q9H611 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
PIF1Q9H611 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PIF1Q9H611 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
PIF1Q9H611 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PIF1Q9H611 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PIF1Q9H611 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PIF1Q9H611 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PIF1Q9H611 AL138688.1-201ENST00000624851 1594 ntBASIC16.95■□□□□ 0.3
PIF1Q9H611 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PIF1Q9H611 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
PIF1Q9H611 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PIF1Q9H611 RBM17P1-201ENST00000453646 1190 ntBASIC16.95■□□□□ 0.3
PIF1Q9H611 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.95■□□□□ 0.3
PIF1Q9H611 AC009065.1-201ENST00000564055 1225 ntBASIC16.95■□□□□ 0.3
PIF1Q9H611 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PIF1Q9H611 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PIF1Q9H611 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PIF1Q9H611 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PIF1Q9H611 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PIF1Q9H611 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PIF1Q9H611 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PIF1Q9H611 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PIF1Q9H611 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PIF1Q9H611 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PIF1Q9H611 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PIF1Q9H611 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.95■□□□□ 0.3
PIF1Q9H611 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PIF1Q9H611 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PIF1Q9H611 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.95■□□□□ 0.3
PIF1Q9H611 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms