Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.94■□□□□ 0.3
NDC1Q9BTX1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
NDC1Q9BTX1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NDC1Q9BTX1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NDC1Q9BTX1 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
NDC1Q9BTX1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NDC1Q9BTX1 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NDC1Q9BTX1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NDC1Q9BTX1 PCDHB18P-201ENST00000524813 2368 ntBASIC16.94■□□□□ 0.3
NDC1Q9BTX1 INTS4P1-201ENST00000438455 1935 ntBASIC16.94■□□□□ 0.3
NDC1Q9BTX1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NDC1Q9BTX1 AC097374.2-201ENST00000618617 1306 ntBASIC16.94■□□□□ 0.3
NDC1Q9BTX1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NDC1Q9BTX1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NDC1Q9BTX1 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NDC1Q9BTX1 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
NDC1Q9BTX1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NDC1Q9BTX1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
NDC1Q9BTX1 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NDC1Q9BTX1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NDC1Q9BTX1 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NDC1Q9BTX1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.93■□□□□ 0.3
NDC1Q9BTX1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NDC1Q9BTX1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
NDC1Q9BTX1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NDC1Q9BTX1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.93■□□□□ 0.3
NDC1Q9BTX1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NDC1Q9BTX1 FAM220CP-201ENST00000395253 831 ntBASIC16.93■□□□□ 0.3
NDC1Q9BTX1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.93■□□□□ 0.3
NDC1Q9BTX1 AC079781.3-201ENST00000449110 356 ntBASIC16.93■□□□□ 0.3
NDC1Q9BTX1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.93■□□□□ 0.3
NDC1Q9BTX1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NDC1Q9BTX1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.93■□□□□ 0.3
NDC1Q9BTX1 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.93■□□□□ 0.3
NDC1Q9BTX1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.93■□□□□ 0.3
NDC1Q9BTX1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NDC1Q9BTX1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.93■□□□□ 0.3
NDC1Q9BTX1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NDC1Q9BTX1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NDC1Q9BTX1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NDC1Q9BTX1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NDC1Q9BTX1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.93■□□□□ 0.3
NDC1Q9BTX1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 AC116407.2-201ENST00000613639 860 ntBASIC16.92■□□□□ 0.3
NDC1Q9BTX1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NDC1Q9BTX1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms