Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRUNE2Q8WUY3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRUNE2Q8WUY3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRUNE2Q8WUY3 HLA-DPB2-205ENST00000435074 1188 ntBASIC18.33■□□□□ 0.52
PRUNE2Q8WUY3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRUNE2Q8WUY3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRUNE2Q8WUY3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.33■□□□□ 0.52
PRUNE2Q8WUY3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRUNE2Q8WUY3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRUNE2Q8WUY3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PRUNE2Q8WUY3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PRUNE2Q8WUY3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PRUNE2Q8WUY3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRUNE2Q8WUY3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.32■□□□□ 0.52
PRUNE2Q8WUY3 AC069120.2-201ENST00000524091 540 ntBASIC18.32■□□□□ 0.52
PRUNE2Q8WUY3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRUNE2Q8WUY3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.32■□□□□ 0.52
PRUNE2Q8WUY3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PRUNE2Q8WUY3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRUNE2Q8WUY3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRUNE2Q8WUY3 AC022144.1-201ENST00000602255 1580 ntBASIC18.32■□□□□ 0.52
PRUNE2Q8WUY3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.32■□□□□ 0.52
PRUNE2Q8WUY3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRUNE2Q8WUY3 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
PRUNE2Q8WUY3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.32■□□□□ 0.52
PRUNE2Q8WUY3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRUNE2Q8WUY3 MIR4538-201ENST00000581377 78 ntBASIC18.32■□□□□ 0.52
PRUNE2Q8WUY3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.32■□□□□ 0.52
PRUNE2Q8WUY3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.32■□□□□ 0.52
PRUNE2Q8WUY3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRUNE2Q8WUY3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
PRUNE2Q8WUY3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PRUNE2Q8WUY3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRUNE2Q8WUY3 AC097637.2-201ENST00000624096 1997 ntBASIC18.32■□□□□ 0.52
PRUNE2Q8WUY3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.32■□□□□ 0.52
PRUNE2Q8WUY3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.32■□□□□ 0.52
PRUNE2Q8WUY3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.32■□□□□ 0.52
PRUNE2Q8WUY3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 KRT17P8-201ENST00000540749 863 ntBASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 AC138969.3-201ENST00000546612 1459 ntBASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 AC138932.2-201ENST00000548268 1459 ntBASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 AC126755.4-201ENST00000549796 1459 ntBASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRUNE2Q8WUY3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 FAM185BP-201ENST00000443595 716 ntBASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 AC009118.2-201ENST00000613275 655 ntBASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 SPDYE14P-201ENST00000442619 822 ntBASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 AC112191.1-201ENST00000523689 701 ntBASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PRUNE2Q8WUY3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms