Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 MIR940-201ENST00000401276 94 ntBASIC19.23■□□□□ 0.67
VPS52Q8N1B4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 AP005117.1-201ENST00000584346 1413 ntBASIC19.23■□□□□ 0.67
VPS52Q8N1B4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS52Q8N1B4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS52Q8N1B4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
VPS52Q8N1B4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.22■□□□□ 0.67
VPS52Q8N1B4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS52Q8N1B4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS52Q8N1B4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS52Q8N1B4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.22■□□□□ 0.67
VPS52Q8N1B4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
VPS52Q8N1B4 KRT18P65-201ENST00000439811 1286 ntBASIC19.22■□□□□ 0.67
VPS52Q8N1B4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.22■□□□□ 0.67
VPS52Q8N1B4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.22■□□□□ 0.67
VPS52Q8N1B4 AC092865.5-201ENST00000545435 363 ntBASIC19.22■□□□□ 0.67
VPS52Q8N1B4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.22■□□□□ 0.67
VPS52Q8N1B4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.22■□□□□ 0.67
VPS52Q8N1B4 TERC-201ENST00000602385 541 ntBASIC19.22■□□□□ 0.67
VPS52Q8N1B4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VPS52Q8N1B4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.22■□□□□ 0.67
VPS52Q8N1B4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
VPS52Q8N1B4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS52Q8N1B4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.22■□□□□ 0.67
VPS52Q8N1B4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.22■□□□□ 0.67
VPS52Q8N1B4 AL390961.4-201ENST00000623958 2535 ntBASIC19.22■□□□□ 0.67
VPS52Q8N1B4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
VPS52Q8N1B4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS52Q8N1B4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS52Q8N1B4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.22■□□□□ 0.67
VPS52Q8N1B4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.22■□□□□ 0.67
VPS52Q8N1B4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS52Q8N1B4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS52Q8N1B4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS52Q8N1B4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
VPS52Q8N1B4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS52Q8N1B4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.21■□□□□ 0.67
VPS52Q8N1B4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS52Q8N1B4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS52Q8N1B4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.21■□□□□ 0.67
VPS52Q8N1B4 AC135050.7-201ENST00000624508 2218 ntBASIC19.21■□□□□ 0.67
VPS52Q8N1B4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS52Q8N1B4 ZNF259P1-201ENST00000407656 1365 ntBASIC19.21■□□□□ 0.67
VPS52Q8N1B4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS52Q8N1B4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.21■□□□□ 0.67
VPS52Q8N1B4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
VPS52Q8N1B4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS52Q8N1B4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS52Q8N1B4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VPS52Q8N1B4 ABCD1P5-201ENST00000445663 754 ntBASIC19.21■□□□□ 0.67
VPS52Q8N1B4 AC021087.4-201ENST00000563761 564 ntBASIC19.21■□□□□ 0.67
VPS52Q8N1B4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.21■□□□□ 0.67
VPS52Q8N1B4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.21■□□□□ 0.67
VPS52Q8N1B4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
VPS52Q8N1B4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VPS52Q8N1B4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS52Q8N1B4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS52Q8N1B4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS52Q8N1B4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VPS52Q8N1B4 PMS2P7-201ENST00000506558 1336 ntBASIC19.21■□□□□ 0.67
VPS52Q8N1B4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
VPS52Q8N1B4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
VPS52Q8N1B4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VPS52Q8N1B4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.21■□□□□ 0.66
VPS52Q8N1B4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
VPS52Q8N1B4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.2■□□□□ 0.66
VPS52Q8N1B4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.2■□□□□ 0.66
VPS52Q8N1B4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS52Q8N1B4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS52Q8N1B4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VPS52Q8N1B4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS52Q8N1B4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS52Q8N1B4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS52Q8N1B4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
VPS52Q8N1B4 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.2■□□□□ 0.66
VPS52Q8N1B4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
VPS52Q8N1B4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VPS52Q8N1B4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms