Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC50Q8IVM0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC50Q8IVM0 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC50Q8IVM0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC50Q8IVM0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC50Q8IVM0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC50Q8IVM0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.75■□□□□ 0.59
CCDC50Q8IVM0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC50Q8IVM0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CCDC50Q8IVM0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CCDC50Q8IVM0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC50Q8IVM0 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC50Q8IVM0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC50Q8IVM0 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCDC50Q8IVM0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CCDC50Q8IVM0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC50Q8IVM0 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC50Q8IVM0 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC50Q8IVM0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC50Q8IVM0 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC50Q8IVM0 LINC00167-201ENST00000530583 1419 ntBASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 AL391005.1-201ENST00000623953 2435 ntBASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 AC034232.1-201ENST00000506026 1064 ntBASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 GCSHP2-201ENST00000560971 527 ntBASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC50Q8IVM0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 AL645608.8-201ENST00000606034 2086 ntBASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 AC066615.1-201ENST00000640911 628 ntBASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC50Q8IVM0 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC50Q8IVM0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC50Q8IVM0 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC50Q8IVM0 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms