Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC28Q86X40 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC28Q86X40 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.81■□□□□ 0.12
LRRC28Q86X40 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.81■□□□□ 0.12
LRRC28Q86X40 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC28Q86X40 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.81■□□□□ 0.12
LRRC28Q86X40 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC28Q86X40 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.81■□□□□ 0.12
LRRC28Q86X40 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
LRRC28Q86X40 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.81■□□□□ 0.12
LRRC28Q86X40 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.81■□□□□ 0.12
LRRC28Q86X40 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC28Q86X40 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.81■□□□□ 0.12
LRRC28Q86X40 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.81■□□□□ 0.12
LRRC28Q86X40 AC141257.4-201ENST00000634557 245 ntBASIC15.81■□□□□ 0.12
LRRC28Q86X40 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC28Q86X40 AC136944.6-201ENST00000634818 245 ntBASIC15.81■□□□□ 0.12
LRRC28Q86X40 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
LRRC28Q86X40 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
LRRC28Q86X40 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC28Q86X40 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRC28Q86X40 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC28Q86X40 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC28Q86X40 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC28Q86X40 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRC28Q86X40 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC28Q86X40 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.8■□□□□ 0.12
LRRC28Q86X40 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC28Q86X40 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC28Q86X40 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LRRC28Q86X40 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC28Q86X40 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRC28Q86X40 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRC28Q86X40 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRC28Q86X40 CROCCP2-202ENST00000412962 2773 ntBASIC15.8■□□□□ 0.12
LRRC28Q86X40 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
LRRC28Q86X40 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC28Q86X40 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC28Q86X40 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC28Q86X40 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.8■□□□□ 0.12
LRRC28Q86X40 AC104076.2-201ENST00000448912 469 ntBASIC15.8■□□□□ 0.12
LRRC28Q86X40 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC28Q86X40 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC28Q86X40 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
LRRC28Q86X40 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRC28Q86X40 AC008622.2-201ENST00000617006 1229 ntBASIC15.8■□□□□ 0.12
LRRC28Q86X40 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
LRRC28Q86X40 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC28Q86X40 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LRRC28Q86X40 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LRRC28Q86X40 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LRRC28Q86X40 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC28Q86X40 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC28Q86X40 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC28Q86X40 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC28Q86X40 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC28Q86X40 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC28Q86X40 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LRRC28Q86X40 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
LRRC28Q86X40 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC28Q86X40 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC28Q86X40 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRC28Q86X40 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC28Q86X40 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LRRC28Q86X40 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC28Q86X40 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRC28Q86X40 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC28Q86X40 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC28Q86X40 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
LRRC28Q86X40 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LRRC28Q86X40 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC28Q86X40 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC28Q86X40 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC28Q86X40 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC28Q86X40 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC28Q86X40 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.79■□□□□ 0.12
LRRC28Q86X40 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.79■□□□□ 0.12
LRRC28Q86X40 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.79■□□□□ 0.12
LRRC28Q86X40 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.79■□□□□ 0.12
LRRC28Q86X40 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC28Q86X40 AL049597.2-201ENST00000565575 961 ntBASIC15.79■□□□□ 0.12
LRRC28Q86X40 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.79■□□□□ 0.12
LRRC28Q86X40 AC010331.1-201ENST00000611423 582 ntBASIC15.79■□□□□ 0.12
LRRC28Q86X40 AL031432.5-201ENST00000641059 760 ntBASIC15.79■□□□□ 0.12
LRRC28Q86X40 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC28Q86X40 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC28Q86X40 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC28Q86X40 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRC28Q86X40 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LRRC28Q86X40 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC28Q86X40 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRC28Q86X40 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC28Q86X40 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRC28Q86X40 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
LRRC28Q86X40 AC133963.1-201ENST00000504166 1679 ntBASIC15.79■□□□□ 0.12
LRRC28Q86X40 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC28Q86X40 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC28Q86X40 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC28Q86X40 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC28Q86X40 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms