Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM4P67936 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TPM4P67936 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM4P67936 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM4P67936 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM4P67936 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC19.9■□□□□ 0.78
TPM4P67936 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TPM4P67936 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM4P67936 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM4P67936 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
TPM4P67936 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM4P67936 SLC25A1P2-201ENST00000430693 912 ntBASIC19.9■□□□□ 0.78
TPM4P67936 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.9■□□□□ 0.78
TPM4P67936 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.9■□□□□ 0.78
TPM4P67936 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
TPM4P67936 AC010240.3-201ENST00000607688 395 ntBASIC19.9■□□□□ 0.78
TPM4P67936 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM4P67936 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TPM4P67936 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TPM4P67936 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TPM4P67936 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM4P67936 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.9■□□□□ 0.78
TPM4P67936 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
TPM4P67936 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TPM4P67936 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.9■□□□□ 0.78
TPM4P67936 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
TPM4P67936 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TPM4P67936 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TPM4P67936 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM4P67936 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM4P67936 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM4P67936 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM4P67936 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM4P67936 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.89■□□□□ 0.77
TPM4P67936 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TPM4P67936 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM4P67936 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.89■□□□□ 0.77
TPM4P67936 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.89■□□□□ 0.77
TPM4P67936 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.89■□□□□ 0.77
TPM4P67936 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.89■□□□□ 0.77
TPM4P67936 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.89■□□□□ 0.77
TPM4P67936 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.89■□□□□ 0.77
TPM4P67936 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM4P67936 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
TPM4P67936 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.89■□□□□ 0.77
TPM4P67936 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.89■□□□□ 0.77
TPM4P67936 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.88■□□□□ 0.77
TPM4P67936 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TPM4P67936 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TPM4P67936 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TPM4P67936 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.88■□□□□ 0.77
TPM4P67936 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM4P67936 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TPM4P67936 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TPM4P67936 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM4P67936 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.88■□□□□ 0.77
TPM4P67936 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM4P67936 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
TPM4P67936 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM4P67936 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM4P67936 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TPM4P67936 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM4P67936 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM4P67936 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM4P67936 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TPM4P67936 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM4P67936 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM4P67936 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.88■□□□□ 0.77
TPM4P67936 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM4P67936 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM4P67936 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM4P67936 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TPM4P67936 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.88■□□□□ 0.77
TPM4P67936 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.88■□□□□ 0.77
TPM4P67936 AL353719.1-201ENST00000566847 864 ntBASIC19.88■□□□□ 0.77
TPM4P67936 AP005242.2-201ENST00000580065 1175 ntBASIC19.88■□□□□ 0.77
TPM4P67936 AP001412.1-201ENST00000608405 714 ntBASIC19.88■□□□□ 0.77
TPM4P67936 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TPM4P67936 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM4P67936 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.88■□□□□ 0.77
TPM4P67936 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.88■□□□□ 0.77
TPM4P67936 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM4P67936 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TPM4P67936 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM4P67936 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
TPM4P67936 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.88■□□□□ 0.77
TPM4P67936 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM4P67936 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.88■□□□□ 0.77
TPM4P67936 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM4P67936 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC19.88■□□□□ 0.77
TPM4P67936 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TPM4P67936 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.88■□□□□ 0.77
TPM4P67936 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TPM4P67936 AC011270.2-201ENST00000624293 2550 ntBASIC19.88■□□□□ 0.77
TPM4P67936 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TPM4P67936 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TPM4P67936 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TPM4P67936 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TPM4P67936 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TPM4P67936 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms