Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.72■□□□□ 0.43
CBX6O95503 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CBX6O95503 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX6O95503 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX6O95503 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX6O95503 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX6O95503 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
CBX6O95503 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX6O95503 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CBX6O95503 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CBX6O95503 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.71■□□□□ 0.43
CBX6O95503 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CBX6O95503 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CBX6O95503 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CBX6O95503 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX6O95503 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX6O95503 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX6O95503 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CBX6O95503 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX6O95503 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.71■□□□□ 0.43
CBX6O95503 FAM8A6P-201ENST00000407496 1135 ntBASIC17.71■□□□□ 0.43
CBX6O95503 AC004980.1-204ENST00000429707 299 ntBASIC17.71■□□□□ 0.43
CBX6O95503 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CBX6O95503 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.71■□□□□ 0.43
CBX6O95503 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.71■□□□□ 0.43
CBX6O95503 AC131212.4-201ENST00000623606 975 ntBASIC17.71■□□□□ 0.43
CBX6O95503 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.71■□□□□ 0.43
CBX6O95503 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.71■□□□□ 0.43
CBX6O95503 PCDHA14-201ENST00000506751 2298 ntBASIC17.71■□□□□ 0.43
CBX6O95503 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX6O95503 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX6O95503 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX6O95503 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CBX6O95503 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX6O95503 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX6O95503 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CBX6O95503 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CBX6O95503 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CBX6O95503 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.71■□□□□ 0.43
CBX6O95503 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.71■□□□□ 0.43
CBX6O95503 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CBX6O95503 AGGF1P2-201ENST00000426656 2106 ntBASIC17.71■□□□□ 0.42
CBX6O95503 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CBX6O95503 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CBX6O95503 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CBX6O95503 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.71■□□□□ 0.42
CBX6O95503 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CBX6O95503 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CBX6O95503 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX6O95503 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX6O95503 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX6O95503 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.7■□□□□ 0.42
CBX6O95503 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX6O95503 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CBX6O95503 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.7■□□□□ 0.42
CBX6O95503 AC008741.2-201ENST00000612792 3115 ntBASIC17.7■□□□□ 0.42
CBX6O95503 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
CBX6O95503 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX6O95503 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX6O95503 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX6O95503 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.7■□□□□ 0.42
CBX6O95503 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX6O95503 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.7■□□□□ 0.42
CBX6O95503 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX6O95503 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX6O95503 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX6O95503 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX6O95503 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.7■□□□□ 0.42
CBX6O95503 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.7■□□□□ 0.42
CBX6O95503 AL031133.1-201ENST00000406807 723 ntBASIC17.7■□□□□ 0.42
CBX6O95503 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CBX6O95503 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.7■□□□□ 0.42
CBX6O95503 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.7■□□□□ 0.42
CBX6O95503 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CBX6O95503 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CBX6O95503 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.7■□□□□ 0.42
CBX6O95503 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX6O95503 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX6O95503 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX6O95503 AL138688.1-201ENST00000624851 1594 ntBASIC17.7■□□□□ 0.42
CBX6O95503 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX6O95503 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.7■□□□□ 0.42
CBX6O95503 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CBX6O95503 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX6O95503 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX6O95503 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX6O95503 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX6O95503 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX6O95503 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX6O95503 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CBX6O95503 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.69■□□□□ 0.42
CBX6O95503 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.69■□□□□ 0.42
CBX6O95503 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX6O95503 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.69■□□□□ 0.42
CBX6O95503 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX6O95503 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.69■□□□□ 0.42
CBX6O95503 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX6O95503 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX6O95503 RNF152P1-201ENST00000397754 604 ntBASIC17.69■□□□□ 0.42
CBX6O95503 HMGA1P5-201ENST00000412453 271 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms