Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MBD4O95243 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.13■□□□□ 0.97
MBD4O95243 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MBD4O95243 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MBD4O95243 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.13■□□□□ 0.97
MBD4O95243 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
MBD4O95243 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
MBD4O95243 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MBD4O95243 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
MBD4O95243 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MBD4O95243 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
MBD4O95243 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
MBD4O95243 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.13■□□□□ 0.97
MBD4O95243 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MBD4O95243 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
MBD4O95243 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.13■□□□□ 0.97
MBD4O95243 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
MBD4O95243 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MBD4O95243 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC21.13■□□□□ 0.97
MBD4O95243 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
MBD4O95243 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
MBD4O95243 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC21.13■□□□□ 0.97
MBD4O95243 AC109462.3-201ENST00000573934 613 ntBASIC21.13■□□□□ 0.97
MBD4O95243 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC21.13■□□□□ 0.97
MBD4O95243 AC073592.5-201ENST00000624854 528 ntBASIC21.13■□□□□ 0.97
MBD4O95243 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.13■□□□□ 0.97
MBD4O95243 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
MBD4O95243 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.13■□□□□ 0.97
MBD4O95243 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.13■□□□□ 0.97
MBD4O95243 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MBD4O95243 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21.13■□□□□ 0.97
MBD4O95243 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
MBD4O95243 AL353593.2-201ENST00000602529 1483 ntBASIC21.13■□□□□ 0.97
MBD4O95243 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.13■□□□□ 0.97
MBD4O95243 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.13■□□□□ 0.97
MBD4O95243 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MBD4O95243 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MBD4O95243 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MBD4O95243 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MBD4O95243 REXO1L11P-201ENST00000620964 1927 ntBASIC21.12■□□□□ 0.97
MBD4O95243 AL356309.3-201ENST00000624132 1934 ntBASIC21.12■□□□□ 0.97
MBD4O95243 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MBD4O95243 AC006116.8-202ENST00000587620 1550 ntBASIC21.12■□□□□ 0.97
MBD4O95243 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.12■□□□□ 0.97
MBD4O95243 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MBD4O95243 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MBD4O95243 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC21.12■□□□□ 0.97
MBD4O95243 TLE1-202ENST00000376484 666 ntTSL 3 BASIC21.12■□□□□ 0.97
MBD4O95243 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MBD4O95243 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.12■□□□□ 0.97
MBD4O95243 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MBD4O95243 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC21.12■□□□□ 0.97
MBD4O95243 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.12■□□□□ 0.97
MBD4O95243 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
MBD4O95243 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MBD4O95243 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MBD4O95243 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.12■□□□□ 0.97
MBD4O95243 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MBD4O95243 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
MBD4O95243 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
MBD4O95243 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.12■□□□□ 0.97
MBD4O95243 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC21.12■□□□□ 0.97
MBD4O95243 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MBD4O95243 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MBD4O95243 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC21.11■□□□□ 0.97
MBD4O95243 AC132938.5-201ENST00000624980 1813 ntBASIC21.11■□□□□ 0.97
MBD4O95243 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.11■□□□□ 0.97
MBD4O95243 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
MBD4O95243 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MBD4O95243 KRT18P67-201ENST00000432816 1264 ntBASIC21.11■□□□□ 0.97
MBD4O95243 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MBD4O95243 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.11■□□□□ 0.97
MBD4O95243 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
MBD4O95243 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC21.11■□□□□ 0.97
MBD4O95243 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MBD4O95243 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MBD4O95243 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MBD4O95243 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
MBD4O95243 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21.11■□□□□ 0.97
MBD4O95243 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MBD4O95243 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.11■□□□□ 0.97
MBD4O95243 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
MBD4O95243 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC21.1■□□□□ 0.97
MBD4O95243 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MBD4O95243 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.1■□□□□ 0.97
MBD4O95243 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MBD4O95243 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.1■□□□□ 0.97
MBD4O95243 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MBD4O95243 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MBD4O95243 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
MBD4O95243 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
MBD4O95243 AC008764.6-201ENST00000595909 2069 ntBASIC21.1■□□□□ 0.97
MBD4O95243 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MBD4O95243 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC21.1■□□□□ 0.97
MBD4O95243 NKTR-203ENST00000442970 646 ntTSL 2 BASIC21.1■□□□□ 0.97
MBD4O95243 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.1■□□□□ 0.97
MBD4O95243 SCARNA2-201ENST00000458748 420 ntBASIC21.1■□□□□ 0.97
MBD4O95243 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
MBD4O95243 BX005266.1-201ENST00000473402 457 ntBASIC21.1■□□□□ 0.97
MBD4O95243 RNPS1P1-201ENST00000507437 918 ntBASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms