Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC24.42■■□□□ 1.5
CHD2O14647 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
CHD2O14647 AC107918.2-201ENST00000530817 355 ntBASIC24.42■■□□□ 1.5
CHD2O14647 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CHD2O14647 BAD-207ENST00000544785 525 ntTSL 3 BASIC24.42■■□□□ 1.5
CHD2O14647 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC24.42■■□□□ 1.5
CHD2O14647 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHD2O14647 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC24.42■■□□□ 1.5
CHD2O14647 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHD2O14647 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC24.41■■□□□ 1.5
CHD2O14647 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC24.41■■□□□ 1.5
CHD2O14647 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHD2O14647 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHD2O14647 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CHD2O14647 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
CHD2O14647 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CHD2O14647 RPL30-202ENST00000396070 440 ntTSL 2 BASIC24.41■■□□□ 1.5
CHD2O14647 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC24.41■■□□□ 1.5
CHD2O14647 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC24.41■■□□□ 1.5
CHD2O14647 RN7SL589P-201ENST00000481268 310 ntBASIC24.41■■□□□ 1.5
CHD2O14647 IGHV3-52-201ENST00000519770 353 ntBASIC24.41■■□□□ 1.5
CHD2O14647 AP005018.1-201ENST00000525475 301 ntBASIC24.41■■□□□ 1.5
CHD2O14647 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC24.41■■□□□ 1.5
CHD2O14647 CECR7-204ENST00000609932 568 ntTSL 2 BASIC24.41■■□□□ 1.5
CHD2O14647 AL390754.1-201ENST00000619088 582 ntBASIC24.41■■□□□ 1.5
CHD2O14647 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
CHD2O14647 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHD2O14647 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
CHD2O14647 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHD2O14647 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
CHD2O14647 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC24.41■■□□□ 1.5
CHD2O14647 AC009949.1-201ENST00000623048 1830 ntBASIC24.41■■□□□ 1.5
CHD2O14647 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHD2O14647 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC24.41■■□□□ 1.5
CHD2O14647 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHD2O14647 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHD2O14647 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CHD2O14647 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CHD2O14647 TUBB3P1-201ENST00000405796 1332 ntBASIC24.4■■□□□ 1.5
CHD2O14647 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHD2O14647 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHD2O14647 TREML5P-201ENST00000421694 576 ntBASIC24.4■■□□□ 1.5
CHD2O14647 AC243562.1-201ENST00000560672 389 ntBASIC24.4■■□□□ 1.5
CHD2O14647 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC24.4■■□□□ 1.5
CHD2O14647 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC24.4■■□□□ 1.5
CHD2O14647 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHD2O14647 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
CHD2O14647 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHD2O14647 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHD2O14647 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHD2O14647 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHD2O14647 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CHD2O14647 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHD2O14647 AL592309.1-201ENST00000443127 649 ntBASIC24.4■■□□□ 1.5
CHD2O14647 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHD2O14647 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
CHD2O14647 COX11-202ENST00000571584 1108 ntTSL 2 BASIC24.4■■□□□ 1.5
CHD2O14647 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC24.4■■□□□ 1.5
CHD2O14647 FLYWCH1P1-201ENST00000460917 1874 ntBASIC24.39■■□□□ 1.5
CHD2O14647 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
CHD2O14647 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC24.39■■□□□ 1.5
CHD2O14647 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
CHD2O14647 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
CHD2O14647 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CHD2O14647 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
CHD2O14647 EDF1-203ENST00000371649 790 ntTSL 2 BASIC24.39■■□□□ 1.49
CHD2O14647 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC24.39■■□□□ 1.49
CHD2O14647 HNRNPA1P40-201ENST00000426371 1278 ntBASIC24.39■■□□□ 1.49
CHD2O14647 AC092580.3-201ENST00000430932 139 ntBASIC24.39■■□□□ 1.49
CHD2O14647 FAM185BP-201ENST00000443595 716 ntBASIC24.39■■□□□ 1.49
CHD2O14647 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC24.39■■□□□ 1.49
CHD2O14647 AC002558.1-201ENST00000488906 803 ntBASIC24.39■■□□□ 1.49
CHD2O14647 HARS-203ENST00000431330 1774 ntTSL 2 BASIC24.39■■□□□ 1.49
CHD2O14647 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CHD2O14647 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC24.39■■□□□ 1.49
CHD2O14647 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CHD2O14647 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CHD2O14647 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
CHD2O14647 FO538757.1-201ENST00000623083 1397 ntBASIC24.38■■□□□ 1.49
CHD2O14647 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHD2O14647 AC129492.6-201ENST00000611383 1305 ntBASIC24.38■■□□□ 1.49
CHD2O14647 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHD2O14647 GRAP-202ENST00000395635 834 ntTSL 2 BASIC24.38■■□□□ 1.49
CHD2O14647 MRPS18AP1-201ENST00000414458 589 ntBASIC24.38■■□□□ 1.49
CHD2O14647 AL158211.3-201ENST00000607385 239 ntBASIC24.38■■□□□ 1.49
CHD2O14647 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHD2O14647 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHD2O14647 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC24.38■■□□□ 1.49
CHD2O14647 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
CHD2O14647 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHD2O14647 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHD2O14647 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHD2O14647 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CHD2O14647 AKAP8P1-201ENST00000434743 1349 ntBASIC24.38■■□□□ 1.49
CHD2O14647 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHD2O14647 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC24.38■■□□□ 1.49
CHD2O14647 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CHD2O14647 SPDYE14P-201ENST00000442619 822 ntBASIC24.38■■□□□ 1.49
CHD2O14647 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
CHD2O14647 AC125807.1-201ENST00000483097 614 ntBASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms