Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB9Q9Y5E1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHB9Q9Y5E1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB9Q9Y5E1 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB9Q9Y5E1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB9Q9Y5E1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB9Q9Y5E1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB9Q9Y5E1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PCDHB9Q9Y5E1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
PCDHB9Q9Y5E1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 NSUN5P1-202ENST00000421140 1535 ntBASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 NSUN5P2-203ENST00000457352 1529 ntBASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 AC018470.1-201ENST00000624790 3129 ntBASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 AKR1C7P-201ENST00000305623 895 ntBASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 AF186996.4-201ENST00000467186 377 ntBASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 AF238378.1-201ENST00000526806 358 ntBASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 KRT8P47-201ENST00000604727 1398 ntBASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB9Q9Y5E1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCDHB9Q9Y5E1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB9Q9Y5E1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PCDHB9Q9Y5E1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB9Q9Y5E1 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB9Q9Y5E1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB9Q9Y5E1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB9Q9Y5E1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHB9Q9Y5E1 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB9Q9Y5E1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PCDHB9Q9Y5E1 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PCDHB9Q9Y5E1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB9Q9Y5E1 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms