Protein–RNA interactions for Protein: Q9UPU9

SAMD4A, Protein Smaug homolog 1, humanhuman

Known RBP Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4AQ9UPU9 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 AC026471.5-201ENST00000615068 467 ntBASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SAMD4AQ9UPU9 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 AC233702.5-201ENST00000584107 538 ntBASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 AL049637.2-201ENST00000641778 930 ntBASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.62■□□□□ 0.25
SAMD4AQ9UPU9 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 UNC93B2-201ENST00000285383 730 ntBASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 AC007663.1-201ENST00000438948 1240 ntBASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 SEC1P-202ENST00000473944 940 ntBASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 AC010653.2-201ENST00000623505 997 ntBASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 AC016396.2-201ENST00000562575 1417 ntBASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SAMD4AQ9UPU9 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SAMD4AQ9UPU9 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SAMD4AQ9UPU9 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.6■□□□□ 0.25
SAMD4AQ9UPU9 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.6■□□□□ 0.25
SAMD4AQ9UPU9 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SAMD4AQ9UPU9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.6■□□□□ 0.25
SAMD4AQ9UPU9 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SAMD4AQ9UPU9 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SAMD4AQ9UPU9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SAMD4AQ9UPU9 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SAMD4AQ9UPU9 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.6■□□□□ 0.25
SAMD4AQ9UPU9 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SAMD4AQ9UPU9 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SAMD4AQ9UPU9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms