Protein–RNA interactions for Protein: Q8N556

AFAP1, Actin filament-associated protein 1, humanhuman

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1Q8N556 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
AFAP1Q8N556 AJ011932.1-201ENST00000621707 465 ntBASIC26.35■■□□□ 1.81
AFAP1Q8N556 AC009093.7-201ENST00000623853 1223 ntBASIC26.35■■□□□ 1.81
AFAP1Q8N556 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
AFAP1Q8N556 AL031598.1-201ENST00000561511 1773 ntBASIC26.35■■□□□ 1.81
AFAP1Q8N556 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
AFAP1Q8N556 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
AFAP1Q8N556 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
AFAP1Q8N556 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
AFAP1Q8N556 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
AFAP1Q8N556 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
AFAP1Q8N556 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
AFAP1Q8N556 COPE-202ENST00000349893 948 ntTSL 2 BASIC26.34■■□□□ 1.81
AFAP1Q8N556 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
AFAP1Q8N556 NMU-203ENST00000507338 658 ntTSL 3 BASIC26.34■■□□□ 1.81
AFAP1Q8N556 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
AFAP1Q8N556 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
AFAP1Q8N556 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
AFAP1Q8N556 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC26.34■■□□□ 1.81
AFAP1Q8N556 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC26.34■■□□□ 1.81
AFAP1Q8N556 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
AFAP1Q8N556 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC26.34■■□□□ 1.81
AFAP1Q8N556 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
AFAP1Q8N556 AL590787.1-201ENST00000568856 1315 ntBASIC26.34■■□□□ 1.81
AFAP1Q8N556 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
AFAP1Q8N556 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC26.34■■□□□ 1.81
AFAP1Q8N556 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
AFAP1Q8N556 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC26.33■■□□□ 1.81
AFAP1Q8N556 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
AFAP1Q8N556 EFTUD1P1-204ENST00000560401 1798 ntBASIC26.33■■□□□ 1.81
AFAP1Q8N556 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
AFAP1Q8N556 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
AFAP1Q8N556 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
AFAP1Q8N556 MIR661-201ENST00000384842 89 ntBASIC26.33■■□□□ 1.81
AFAP1Q8N556 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC26.33■■□□□ 1.81
AFAP1Q8N556 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC26.33■■□□□ 1.81
AFAP1Q8N556 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC26.33■■□□□ 1.81
AFAP1Q8N556 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC26.33■■□□□ 1.81
AFAP1Q8N556 AC190387.1-201ENST00000551683 408 ntBASIC26.33■■□□□ 1.81
AFAP1Q8N556 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC26.33■■□□□ 1.81
AFAP1Q8N556 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC26.33■■□□□ 1.81
AFAP1Q8N556 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC26.33■■□□□ 1.81
AFAP1Q8N556 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC26.33■■□□□ 1.81
AFAP1Q8N556 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
AFAP1Q8N556 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
AFAP1Q8N556 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC26.33■■□□□ 1.81
AFAP1Q8N556 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.81
AFAP1Q8N556 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC26.33■■□□□ 1.81
AFAP1Q8N556 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
AFAP1Q8N556 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
AFAP1Q8N556 AC009949.1-201ENST00000623048 1830 ntBASIC26.32■■□□□ 1.8
AFAP1Q8N556 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
AFAP1Q8N556 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC26.32■■□□□ 1.8
AFAP1Q8N556 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
AFAP1Q8N556 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
AFAP1Q8N556 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
AFAP1Q8N556 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
AFAP1Q8N556 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC26.32■■□□□ 1.8
AFAP1Q8N556 PUDP-206ENST00000540122 825 ntTSL 2 BASIC26.32■■□□□ 1.8
AFAP1Q8N556 RBM7-207ENST00000544582 692 ntTSL 3 BASIC26.32■■□□□ 1.8
AFAP1Q8N556 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC26.32■■□□□ 1.8
AFAP1Q8N556 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
AFAP1Q8N556 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
AFAP1Q8N556 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC26.32■■□□□ 1.8
AFAP1Q8N556 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
AFAP1Q8N556 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC26.32■■□□□ 1.8
AFAP1Q8N556 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
AFAP1Q8N556 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC26.32■■□□□ 1.8
AFAP1Q8N556 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
AFAP1Q8N556 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
AFAP1Q8N556 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC26.31■■□□□ 1.8
AFAP1Q8N556 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
AFAP1Q8N556 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC26.31■■□□□ 1.8
AFAP1Q8N556 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
AFAP1Q8N556 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
AFAP1Q8N556 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
AFAP1Q8N556 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
AFAP1Q8N556 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
AFAP1Q8N556 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
AFAP1Q8N556 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC26.31■■□□□ 1.8
AFAP1Q8N556 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
AFAP1Q8N556 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC26.31■■□□□ 1.8
AFAP1Q8N556 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC26.31■■□□□ 1.8
AFAP1Q8N556 AL035252.4-201ENST00000624174 288 ntBASIC26.31■■□□□ 1.8
AFAP1Q8N556 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC26.31■■□□□ 1.8
AFAP1Q8N556 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
AFAP1Q8N556 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
AFAP1Q8N556 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
AFAP1Q8N556 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
AFAP1Q8N556 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
AFAP1Q8N556 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
AFAP1Q8N556 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
AFAP1Q8N556 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC26.3■■□□□ 1.8
AFAP1Q8N556 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
AFAP1Q8N556 AL096828.2-201ENST00000567259 1965 ntBASIC26.3■■□□□ 1.8
AFAP1Q8N556 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
AFAP1Q8N556 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
AFAP1Q8N556 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC26.3■■□□□ 1.8
AFAP1Q8N556 TIMM8BP1-201ENST00000452384 211 ntBASIC26.3■■□□□ 1.8
AFAP1Q8N556 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms