Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 MIR1238-201ENST00000408483 83 ntBASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 AC007663.1-201ENST00000438948 1240 ntBASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 SNORA78-201ENST00000459373 127 ntBASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 AL355075.4-201ENST00000554988 638 ntBASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTCHD4Q6ZW05 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCHD4Q6ZW05 KRT8P7-201ENST00000533003 1432 ntBASIC16.36■□□□□ 0.21
PTCHD4Q6ZW05 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCHD4Q6ZW05 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PTCHD4Q6ZW05 AL118508.1-201ENST00000613502 2345 ntBASIC16.36■□□□□ 0.21
PTCHD4Q6ZW05 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.36■□□□□ 0.21
PTCHD4Q6ZW05 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCHD4Q6ZW05 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
PTCHD4Q6ZW05 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PTCHD4Q6ZW05 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.36■□□□□ 0.21
PTCHD4Q6ZW05 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCHD4Q6ZW05 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PTCHD4Q6ZW05 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PTCHD4Q6ZW05 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCHD4Q6ZW05 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCHD4Q6ZW05 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCHD4Q6ZW05 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.36■□□□□ 0.21
PTCHD4Q6ZW05 CCR12P-201ENST00000446203 998 ntBASIC16.36■□□□□ 0.21
PTCHD4Q6ZW05 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PTCHD4Q6ZW05 TMEM191A-211ENST00000637163 1067 ntBASIC16.36■□□□□ 0.21
PTCHD4Q6ZW05 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PTCHD4Q6ZW05 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PTCHD4Q6ZW05 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PTCHD4Q6ZW05 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTCHD4Q6ZW05 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.36■□□□□ 0.21
PTCHD4Q6ZW05 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 BX088651.1-201ENST00000540551 451 ntBASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 AC116562.4-202ENST00000641738 218 ntBASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTCHD4Q6ZW05 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 INGX-201ENST00000359239 846 ntBASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms