Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATPAF1Q5TC12 AP001094.4-201ENST00000579008 2176 ntBASIC15.46■□□□□ 0.07
ATPAF1Q5TC12 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATPAF1Q5TC12 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
ATPAF1Q5TC12 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
ATPAF1Q5TC12 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATPAF1Q5TC12 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATPAF1Q5TC12 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.46■□□□□ 0.07
ATPAF1Q5TC12 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATPAF1Q5TC12 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
ATPAF1Q5TC12 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.46■□□□□ 0.07
ATPAF1Q5TC12 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATPAF1Q5TC12 SEC1P-202ENST00000473944 940 ntBASIC15.46■□□□□ 0.07
ATPAF1Q5TC12 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATPAF1Q5TC12 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.46■□□□□ 0.07
ATPAF1Q5TC12 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.46■□□□□ 0.07
ATPAF1Q5TC12 AC009065.1-201ENST00000564055 1225 ntBASIC15.46■□□□□ 0.07
ATPAF1Q5TC12 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.46■□□□□ 0.07
ATPAF1Q5TC12 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.46■□□□□ 0.07
ATPAF1Q5TC12 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.46■□□□□ 0.07
ATPAF1Q5TC12 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.46■□□□□ 0.07
ATPAF1Q5TC12 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATPAF1Q5TC12 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATPAF1Q5TC12 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATPAF1Q5TC12 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATPAF1Q5TC12 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATPAF1Q5TC12 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ATPAF1Q5TC12 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
ATPAF1Q5TC12 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.46■□□□□ 0.06
ATPAF1Q5TC12 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.46■□□□□ 0.06
ATPAF1Q5TC12 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ATPAF1Q5TC12 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.46■□□□□ 0.06
ATPAF1Q5TC12 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
ATPAF1Q5TC12 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
ATPAF1Q5TC12 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.45■□□□□ 0.06
ATPAF1Q5TC12 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 AL163051.1-201ENST00000569214 1512 ntBASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ATPAF1Q5TC12 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms