Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NR1H2P55055 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H2P55055 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H2P55055 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H2P55055 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H2P55055 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H2P55055 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.89■□□□□ 0.29
NR1H2P55055 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H2P55055 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.88■□□□□ 0.29
NR1H2P55055 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.88■□□□□ 0.29
NR1H2P55055 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NR1H2P55055 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.88■□□□□ 0.29
NR1H2P55055 KRT8P8-201ENST00000434750 1448 ntBASIC16.88■□□□□ 0.29
NR1H2P55055 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NR1H2P55055 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NR1H2P55055 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NR1H2P55055 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NR1H2P55055 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.88■□□□□ 0.29
NR1H2P55055 AL137013.1-201ENST00000432946 1228 ntBASIC16.88■□□□□ 0.29
NR1H2P55055 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.88■□□□□ 0.29
NR1H2P55055 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.88■□□□□ 0.29
NR1H2P55055 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.88■□□□□ 0.29
NR1H2P55055 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.88■□□□□ 0.29
NR1H2P55055 AC010947.1-201ENST00000623454 693 ntBASIC16.88■□□□□ 0.29
NR1H2P55055 AL590326.2-201ENST00000625139 305 ntBASIC16.88■□□□□ 0.29
NR1H2P55055 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.88■□□□□ 0.29
NR1H2P55055 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NR1H2P55055 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NR1H2P55055 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NR1H2P55055 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NR1H2P55055 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NR1H2P55055 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NR1H2P55055 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NR1H2P55055 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NR1H2P55055 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NR1H2P55055 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NR1H2P55055 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
NR1H2P55055 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NR1H2P55055 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NR1H2P55055 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.88■□□□□ 0.29
NR1H2P55055 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NR1H2P55055 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.88■□□□□ 0.29
NR1H2P55055 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H2P55055 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.87■□□□□ 0.29
NR1H2P55055 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H2P55055 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H2P55055 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H2P55055 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.87■□□□□ 0.29
NR1H2P55055 CYP2D8P-201ENST00000433633 1490 ntBASIC16.87■□□□□ 0.29
NR1H2P55055 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.87■□□□□ 0.29
NR1H2P55055 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H2P55055 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
NR1H2P55055 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H2P55055 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H2P55055 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H2P55055 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H2P55055 MESTP1-201ENST00000404287 994 ntBASIC16.87■□□□□ 0.29
NR1H2P55055 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H2P55055 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H2P55055 AC128688.1-201ENST00000487626 519 ntBASIC16.87■□□□□ 0.29
NR1H2P55055 AC097488.1-201ENST00000507834 756 ntBASIC16.87■□□□□ 0.29
NR1H2P55055 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.87■□□□□ 0.29
NR1H2P55055 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.87■□□□□ 0.29
NR1H2P55055 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H2P55055 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H2P55055 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.87■□□□□ 0.29
NR1H2P55055 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H2P55055 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.87■□□□□ 0.29
NR1H2P55055 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NR1H2P55055 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H2P55055 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H2P55055 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H2P55055 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.87■□□□□ 0.29
NR1H2P55055 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H2P55055 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.87■□□□□ 0.29
NR1H2P55055 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
NR1H2P55055 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H2P55055 AGGF1P2-201ENST00000426656 2106 ntBASIC16.87■□□□□ 0.29
NR1H2P55055 AC106886.4-201ENST00000623557 2502 ntBASIC16.87■□□□□ 0.29
NR1H2P55055 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H2P55055 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H2P55055 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NR1H2P55055 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H2P55055 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
NR1H2P55055 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.86■□□□□ 0.29
NR1H2P55055 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H2P55055 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H2P55055 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H2P55055 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H2P55055 AC005521.1-201ENST00000393351 872 ntBASIC16.86■□□□□ 0.29
NR1H2P55055 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
NR1H2P55055 SLC25A3P1-201ENST00000443844 931 ntBASIC16.86■□□□□ 0.29
NR1H2P55055 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H2P55055 EGLN1P1-201ENST00000531623 762 ntBASIC16.86■□□□□ 0.29
NR1H2P55055 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.86■□□□□ 0.29
NR1H2P55055 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.86■□□□□ 0.29
NR1H2P55055 AL049597.2-201ENST00000565575 961 ntBASIC16.86■□□□□ 0.29
NR1H2P55055 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.86■□□□□ 0.29
NR1H2P55055 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H2P55055 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms