Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AL031133.1-201ENST00000406807 723 ntBASIC18.48■□□□□ 0.55
MMP13P45452 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MMP13P45452 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.48■□□□□ 0.55
MMP13P45452 AC113404.2-201ENST00000507884 177 ntBASIC18.48■□□□□ 0.55
MMP13P45452 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
MMP13P45452 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP13P45452 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP13P45452 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
MMP13P45452 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
MMP13P45452 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MMP13P45452 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.48■□□□□ 0.55
MMP13P45452 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP13P45452 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP13P45452 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP13P45452 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP13P45452 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.48■□□□□ 0.55
MMP13P45452 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP13P45452 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.48■□□□□ 0.55
MMP13P45452 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP13P45452 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.48■□□□□ 0.55
MMP13P45452 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP13P45452 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MMP13P45452 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP13P45452 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP13P45452 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
MMP13P45452 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.47■□□□□ 0.55
MMP13P45452 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP13P45452 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP13P45452 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MMP13P45452 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP13P45452 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MMP13P45452 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
MMP13P45452 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
MMP13P45452 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP13P45452 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.47■□□□□ 0.55
MMP13P45452 AP003733.1-201ENST00000491725 852 ntBASIC18.47■□□□□ 0.55
MMP13P45452 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.47■□□□□ 0.55
MMP13P45452 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.47■□□□□ 0.55
MMP13P45452 AC087388.1-201ENST00000571370 1112 ntBASIC18.47■□□□□ 0.55
MMP13P45452 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
MMP13P45452 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
MMP13P45452 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP13P45452 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MMP13P45452 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP13P45452 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP13P45452 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP13P45452 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
MMP13P45452 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MMP13P45452 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MMP13P45452 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP13P45452 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
MMP13P45452 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MMP13P45452 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MMP13P45452 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP13P45452 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.46■□□□□ 0.55
MMP13P45452 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
MMP13P45452 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
MMP13P45452 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MMP13P45452 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP13P45452 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.46■□□□□ 0.55
MMP13P45452 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.46■□□□□ 0.55
MMP13P45452 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.46■□□□□ 0.55
MMP13P45452 MIR1224-201ENST00000408193 85 ntBASIC18.46■□□□□ 0.55
MMP13P45452 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP13P45452 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.46■□□□□ 0.55
MMP13P45452 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.46■□□□□ 0.55
MMP13P45452 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.46■□□□□ 0.55
MMP13P45452 AC010331.1-201ENST00000611423 582 ntBASIC18.46■□□□□ 0.55
MMP13P45452 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.46■□□□□ 0.55
MMP13P45452 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.46■□□□□ 0.55
MMP13P45452 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.46■□□□□ 0.55
MMP13P45452 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MMP13P45452 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MMP13P45452 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP13P45452 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MMP13P45452 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
MMP13P45452 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.46■□□□□ 0.55
MMP13P45452 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
MMP13P45452 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
MMP13P45452 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.46■□□□□ 0.54
MMP13P45452 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.45■□□□□ 0.54
MMP13P45452 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
MMP13P45452 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP13P45452 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
MMP13P45452 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
MMP13P45452 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP13P45452 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP13P45452 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
MMP13P45452 KRT18P55-202ENST00000578578 1546 ntBASIC18.45■□□□□ 0.54
MMP13P45452 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP13P45452 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP13P45452 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
MMP13P45452 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
MMP13P45452 AL645929.1-201ENST00000420084 975 ntBASIC18.45■□□□□ 0.54
MMP13P45452 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MMP13P45452 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.45■□□□□ 0.54
MMP13P45452 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.45■□□□□ 0.54
MMP13P45452 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.45■□□□□ 0.54
MMP13P45452 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.45■□□□□ 0.54
MMP13P45452 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms