Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TCRAP04437 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TCRAP04437 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TCRAP04437 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TCRAP04437 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TCRAP04437 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TCRAP04437 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRAP04437 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.53□□□□□ -0.24
TCRAP04437 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRAP04437 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRAP04437 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.53□□□□□ -0.24
TCRAP04437 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.53□□□□□ -0.24
TCRAP04437 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRAP04437 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC13.53□□□□□ -0.24
TCRAP04437 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRAP04437 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRAP04437 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TCRAP04437 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRAP04437 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TCRAP04437 UBALD1-205ENST00000590891 2641 ntBASIC13.53□□□□□ -0.24
TCRAP04437 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
TCRAP04437 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRAP04437 REXO1L11P-201ENST00000620964 1927 ntBASIC13.53□□□□□ -0.24
TCRAP04437 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.53□□□□□ -0.24
TCRAP04437 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRAP04437 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRAP04437 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
TCRAP04437 CRYGFP-201ENST00000418459 633 ntBASIC13.53□□□□□ -0.24
TCRAP04437 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRAP04437 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC13.53□□□□□ -0.24
TCRAP04437 RPPH1-201ENST00000516869 333 ntBASIC13.53□□□□□ -0.24
TCRAP04437 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TCRAP04437 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC13.53□□□□□ -0.24
TCRAP04437 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC13.53□□□□□ -0.24
TCRAP04437 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TCRAP04437 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
TCRAP04437 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TCRAP04437 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.53□□□□□ -0.24
TCRAP04437 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRAP04437 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC13.53□□□□□ -0.24
TCRAP04437 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRAP04437 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRAP04437 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TCRAP04437 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRAP04437 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TCRAP04437 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRAP04437 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.53□□□□□ -0.24
TCRAP04437 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRAP04437 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRAP04437 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRAP04437 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRAP04437 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TCRAP04437 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRAP04437 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.53□□□□□ -0.24
TCRAP04437 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TCRAP04437 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
TCRAP04437 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.24
TCRAP04437 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
TCRAP04437 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TCRAP04437 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.52□□□□□ -0.24
TCRAP04437 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
TCRAP04437 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
TCRAP04437 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
TCRAP04437 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TCRAP04437 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TCRAP04437 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.52□□□□□ -0.24
TCRAP04437 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TCRAP04437 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TCRAP04437 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TCRAP04437 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TCRAP04437 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TCRAP04437 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TCRAP04437 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC13.52□□□□□ -0.25
TCRAP04437 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC13.52□□□□□ -0.25
TCRAP04437 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC13.52□□□□□ -0.25
TCRAP04437 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC13.52□□□□□ -0.25
TCRAP04437 NUDT16P1-203ENST00000513809 620 ntBASIC13.52□□□□□ -0.25
TCRAP04437 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
TCRAP04437 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TCRAP04437 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC13.52□□□□□ -0.25
TCRAP04437 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC13.52□□□□□ -0.25
TCRAP04437 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC13.52□□□□□ -0.25
TCRAP04437 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC13.52□□□□□ -0.25
TCRAP04437 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TCRAP04437 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TCRAP04437 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.52□□□□□ -0.25
TCRAP04437 AL135905.2-201ENST00000584934 1404 ntBASIC13.52□□□□□ -0.25
TCRAP04437 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC13.52□□□□□ -0.25
TCRAP04437 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TCRAP04437 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TCRAP04437 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.52□□□□□ -0.25
TCRAP04437 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC13.52□□□□□ -0.25
TCRAP04437 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TCRAP04437 AC009949.1-201ENST00000623048 1830 ntBASIC13.52□□□□□ -0.25
TCRAP04437 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TCRAP04437 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TCRAP04437 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TCRAP04437 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.52□□□□□ -0.25
TCRAP04437 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TCRAP04437 AGGF1P2-201ENST00000426656 2106 ntBASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms