Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6AP02538 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6AP02538 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6AP02538 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
KRT6AP02538 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6AP02538 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.24■□□□□ 0.35
KRT6AP02538 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
KRT6AP02538 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6AP02538 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
KRT6AP02538 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.23■□□□□ 0.35
KRT6AP02538 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
KRT6AP02538 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT6AP02538 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KRT6AP02538 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.23■□□□□ 0.35
KRT6AP02538 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT6AP02538 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT6AP02538 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT6AP02538 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT6AP02538 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT6AP02538 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.23■□□□□ 0.35
KRT6AP02538 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT6AP02538 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
KRT6AP02538 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
KRT6AP02538 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT6AP02538 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT6AP02538 TERF1P1-201ENST00000311003 1181 ntBASIC17.23■□□□□ 0.35
KRT6AP02538 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT6AP02538 SPDYE15P-201ENST00000424157 909 ntBASIC17.23■□□□□ 0.35
KRT6AP02538 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT6AP02538 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
KRT6AP02538 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KRT6AP02538 AC139887.4-201ENST00000607877 719 ntBASIC17.23■□□□□ 0.35
KRT6AP02538 AC012306.2-201ENST00000609350 630 ntBASIC17.23■□□□□ 0.35
KRT6AP02538 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.23■□□□□ 0.35
KRT6AP02538 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KRT6AP02538 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT6AP02538 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT6AP02538 AC009949.1-201ENST00000623048 1830 ntBASIC17.23■□□□□ 0.35
KRT6AP02538 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KRT6AP02538 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.23■□□□□ 0.35
KRT6AP02538 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
KRT6AP02538 AL356309.3-201ENST00000624132 1934 ntBASIC17.23■□□□□ 0.35
KRT6AP02538 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT6AP02538 AL138688.1-201ENST00000624851 1594 ntBASIC17.23■□□□□ 0.35
KRT6AP02538 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
KRT6AP02538 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT6AP02538 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT6AP02538 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6AP02538 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT6AP02538 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.22■□□□□ 0.35
KRT6AP02538 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6AP02538 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6AP02538 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT6AP02538 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6AP02538 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6AP02538 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.22■□□□□ 0.35
KRT6AP02538 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6AP02538 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6AP02538 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6AP02538 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6AP02538 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6AP02538 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6AP02538 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.22■□□□□ 0.35
KRT6AP02538 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6AP02538 TSPY12P-201ENST00000421279 868 ntBASIC17.22■□□□□ 0.35
KRT6AP02538 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT6AP02538 YBX1P2-201ENST00000489612 999 ntBASIC17.22■□□□□ 0.35
KRT6AP02538 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.22■□□□□ 0.35
KRT6AP02538 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.22■□□□□ 0.35
KRT6AP02538 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6AP02538 AC004263.2-201ENST00000617183 678 ntBASIC17.22■□□□□ 0.35
KRT6AP02538 LINC01451-201ENST00000623792 534 ntBASIC17.22■□□□□ 0.35
KRT6AP02538 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.22■□□□□ 0.35
KRT6AP02538 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6AP02538 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.22■□□□□ 0.35
KRT6AP02538 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6AP02538 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT6AP02538 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6AP02538 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6AP02538 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6AP02538 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6AP02538 AL139384.1-201ENST00000612143 3047 ntBASIC17.22■□□□□ 0.35
KRT6AP02538 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT6AP02538 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6AP02538 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.21■□□□□ 0.35
KRT6AP02538 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT6AP02538 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT6AP02538 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.21■□□□□ 0.35
KRT6AP02538 HLA-J-201ENST00000462773 1622 ntBASIC17.21■□□□□ 0.35
KRT6AP02538 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT6AP02538 AC139713.2-201ENST00000641328 2723 ntBASIC17.21■□□□□ 0.35
KRT6AP02538 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT6AP02538 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.21■□□□□ 0.35
KRT6AP02538 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT6AP02538 AL645608.8-201ENST00000606034 2086 ntBASIC17.21■□□□□ 0.35
KRT6AP02538 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT6AP02538 LINC00304-203ENST00000565008 1864 ntBASIC17.21■□□□□ 0.35
KRT6AP02538 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.21■□□□□ 0.35
KRT6AP02538 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT6AP02538 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms