Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.63■□□□□ 0.25
HCN1O60741 AC092329.2-201ENST00000598402 547 ntBASIC16.63■□□□□ 0.25
HCN1O60741 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.63■□□□□ 0.25
HCN1O60741 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.63■□□□□ 0.25
HCN1O60741 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HCN1O60741 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HCN1O60741 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCN1O60741 OR6D1P-203ENST00000641209 4860 ntBASIC16.63■□□□□ 0.25
HCN1O60741 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
HCN1O60741 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HCN1O60741 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCN1O60741 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCN1O60741 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
HCN1O60741 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.63■□□□□ 0.25
HCN1O60741 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCN1O60741 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HCN1O60741 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.62■□□□□ 0.25
HCN1O60741 AC134043.2-201ENST00000624206 2238 ntBASIC16.62■□□□□ 0.25
HCN1O60741 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCN1O60741 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.62■□□□□ 0.25
HCN1O60741 AL096828.2-201ENST00000567259 1965 ntBASIC16.62■□□□□ 0.25
HCN1O60741 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HCN1O60741 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HCN1O60741 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCN1O60741 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCN1O60741 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HCN1O60741 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HCN1O60741 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCN1O60741 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.62■□□□□ 0.25
HCN1O60741 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.62■□□□□ 0.25
HCN1O60741 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCN1O60741 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCN1O60741 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCN1O60741 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCN1O60741 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCN1O60741 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCN1O60741 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HCN1O60741 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.62■□□□□ 0.25
HCN1O60741 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.62■□□□□ 0.25
HCN1O60741 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.62■□□□□ 0.25
HCN1O60741 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.62■□□□□ 0.25
HCN1O60741 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.62■□□□□ 0.25
HCN1O60741 AC024563.2-201ENST00000603282 481 ntBASIC16.62■□□□□ 0.25
HCN1O60741 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCN1O60741 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCN1O60741 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.62■□□□□ 0.25
HCN1O60741 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCN1O60741 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCN1O60741 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCN1O60741 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCN1O60741 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HCN1O60741 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
HCN1O60741 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
HCN1O60741 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HCN1O60741 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCN1O60741 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCN1O60741 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HCN1O60741 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.62■□□□□ 0.25
HCN1O60741 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HCN1O60741 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HCN1O60741 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.62■□□□□ 0.25
HCN1O60741 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCN1O60741 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCN1O60741 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCN1O60741 KRT89P-201ENST00000620027 1478 ntBASIC16.61■□□□□ 0.25
HCN1O60741 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.61■□□□□ 0.25
HCN1O60741 AL163051.1-201ENST00000569214 1512 ntBASIC16.61■□□□□ 0.25
HCN1O60741 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.61■□□□□ 0.25
HCN1O60741 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HCN1O60741 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HCN1O60741 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HCN1O60741 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCN1O60741 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCN1O60741 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCN1O60741 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCN1O60741 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCN1O60741 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCN1O60741 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HCN1O60741 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.61■□□□□ 0.25
HCN1O60741 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCN1O60741 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCN1O60741 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HCN1O60741 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HCN1O60741 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.61■□□□□ 0.25
HCN1O60741 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.61■□□□□ 0.25
HCN1O60741 CLEC4GP1-201ENST00000596555 870 ntBASIC16.61■□□□□ 0.25
HCN1O60741 AC092119.3-201ENST00000612618 583 ntBASIC16.61■□□□□ 0.25
HCN1O60741 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCN1O60741 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
HCN1O60741 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCN1O60741 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HCN1O60741 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.61■□□□□ 0.25
HCN1O60741 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HCN1O60741 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCN1O60741 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.61■□□□□ 0.25
HCN1O60741 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.61■□□□□ 0.25
HCN1O60741 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCN1O60741 AC009102.3-201ENST00000623118 1491 ntBASIC16.61■□□□□ 0.25
HCN1O60741 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HCN1O60741 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms