Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
GDF9O60383 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.19■□□□□ 0.34
GDF9O60383 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
GDF9O60383 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GDF9O60383 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GDF9O60383 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.19■□□□□ 0.34
GDF9O60383 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
GDF9O60383 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GDF9O60383 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
GDF9O60383 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.19■□□□□ 0.34
GDF9O60383 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GDF9O60383 TSPY16P-201ENST00000449843 468 ntBASIC17.19■□□□□ 0.34
GDF9O60383 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
GDF9O60383 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.19■□□□□ 0.34
GDF9O60383 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.19■□□□□ 0.34
GDF9O60383 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
GDF9O60383 REXO1L3P-201ENST00000622202 1288 ntBASIC17.19■□□□□ 0.34
GDF9O60383 AC007064.4-201ENST00000637740 555 ntBASIC17.19■□□□□ 0.34
GDF9O60383 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GDF9O60383 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
GDF9O60383 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.19■□□□□ 0.34
GDF9O60383 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
GDF9O60383 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.19■□□□□ 0.34
GDF9O60383 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
GDF9O60383 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
GDF9O60383 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
GDF9O60383 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.19■□□□□ 0.34
GDF9O60383 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GDF9O60383 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.19■□□□□ 0.34
GDF9O60383 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
GDF9O60383 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.18■□□□□ 0.34
GDF9O60383 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GDF9O60383 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
GDF9O60383 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDF9O60383 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDF9O60383 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
GDF9O60383 AL121761.2-201ENST00000598007 1648 ntBASIC17.18■□□□□ 0.34
GDF9O60383 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDF9O60383 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDF9O60383 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.18■□□□□ 0.34
GDF9O60383 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
GDF9O60383 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
GDF9O60383 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.18■□□□□ 0.34
GDF9O60383 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDF9O60383 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.18■□□□□ 0.34
GDF9O60383 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.18■□□□□ 0.34
GDF9O60383 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GDF9O60383 HLA-V-201ENST00000429037 534 ntBASIC17.18■□□□□ 0.34
GDF9O60383 AC103564.2-201ENST00000432853 1299 ntBASIC17.18■□□□□ 0.34
GDF9O60383 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.18■□□□□ 0.34
GDF9O60383 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.18■□□□□ 0.34
GDF9O60383 MEIS3P1-201ENST00000495167 958 ntBASIC17.18■□□□□ 0.34
GDF9O60383 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
GDF9O60383 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GDF9O60383 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.18■□□□□ 0.34
GDF9O60383 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.18■□□□□ 0.34
GDF9O60383 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDF9O60383 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDF9O60383 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GDF9O60383 AC132938.5-201ENST00000624980 1813 ntBASIC17.18■□□□□ 0.34
GDF9O60383 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.18■□□□□ 0.34
GDF9O60383 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.18■□□□□ 0.34
GDF9O60383 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GDF9O60383 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GDF9O60383 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
GDF9O60383 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GDF9O60383 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDF9O60383 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDF9O60383 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDF9O60383 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
GDF9O60383 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
GDF9O60383 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDF9O60383 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GDF9O60383 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.17■□□□□ 0.34
GDF9O60383 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDF9O60383 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GDF9O60383 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
GDF9O60383 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDF9O60383 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
GDF9O60383 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
GDF9O60383 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
GDF9O60383 PTCHD3P3-201ENST00000403073 906 ntBASIC17.17■□□□□ 0.34
GDF9O60383 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GDF9O60383 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDF9O60383 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.17■□□□□ 0.34
GDF9O60383 UGT1A2P-201ENST00000454886 866 ntBASIC17.17■□□□□ 0.34
GDF9O60383 SIGLEC30P-201ENST00000455569 941 ntBASIC17.17■□□□□ 0.34
GDF9O60383 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.17■□□□□ 0.34
GDF9O60383 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDF9O60383 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.17■□□□□ 0.34
GDF9O60383 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.17■□□□□ 0.34
GDF9O60383 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.17■□□□□ 0.34
GDF9O60383 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.17■□□□□ 0.34
GDF9O60383 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GDF9O60383 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.17■□□□□ 0.34
GDF9O60383 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.17■□□□□ 0.34
GDF9O60383 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.17■□□□□ 0.34
GDF9O60383 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.17■□□□□ 0.34
GDF9O60383 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.17■□□□□ 0.34
GDF9O60383 AL805961.1-202ENST00000641562 540 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms