Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
LDB2O43679 COX5BP2-201ENST00000392354 334 ntBASIC17.75■□□□□ 0.43
LDB2O43679 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LDB2O43679 AC005104.2-201ENST00000427818 678 ntBASIC17.75■□□□□ 0.43
LDB2O43679 AC007967.3-201ENST00000434308 558 ntBASIC17.75■□□□□ 0.43
LDB2O43679 DRAXINP1-201ENST00000437611 948 ntBASIC17.75■□□□□ 0.43
LDB2O43679 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LDB2O43679 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.75■□□□□ 0.43
LDB2O43679 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.75■□□□□ 0.43
LDB2O43679 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.75■□□□□ 0.43
LDB2O43679 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LDB2O43679 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LDB2O43679 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.75■□□□□ 0.43
LDB2O43679 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.75■□□□□ 0.43
LDB2O43679 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.75■□□□□ 0.43
LDB2O43679 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.75■□□□□ 0.43
LDB2O43679 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LDB2O43679 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LDB2O43679 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.75■□□□□ 0.43
LDB2O43679 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.75■□□□□ 0.43
LDB2O43679 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LDB2O43679 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LDB2O43679 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LDB2O43679 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LDB2O43679 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LDB2O43679 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LDB2O43679 KRT18P1-202ENST00000452408 1331 ntBASIC17.74■□□□□ 0.43
LDB2O43679 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LDB2O43679 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LDB2O43679 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LDB2O43679 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
LDB2O43679 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LDB2O43679 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
LDB2O43679 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LDB2O43679 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.74■□□□□ 0.43
LDB2O43679 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LDB2O43679 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.74■□□□□ 0.43
LDB2O43679 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
LDB2O43679 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
LDB2O43679 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LDB2O43679 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LDB2O43679 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LDB2O43679 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.74■□□□□ 0.43
LDB2O43679 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.74■□□□□ 0.43
LDB2O43679 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.74■□□□□ 0.43
LDB2O43679 TPSP2-201ENST00000561760 610 ntBASIC17.74■□□□□ 0.43
LDB2O43679 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.74■□□□□ 0.43
LDB2O43679 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.74■□□□□ 0.43
LDB2O43679 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LDB2O43679 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.74■□□□□ 0.43
LDB2O43679 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LDB2O43679 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.74■□□□□ 0.43
LDB2O43679 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.74■□□□□ 0.43
LDB2O43679 AL138688.1-201ENST00000624851 1594 ntBASIC17.74■□□□□ 0.43
LDB2O43679 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LDB2O43679 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
LDB2O43679 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LDB2O43679 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.74■□□□□ 0.43
LDB2O43679 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LDB2O43679 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LDB2O43679 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.73■□□□□ 0.43
LDB2O43679 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LDB2O43679 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LDB2O43679 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LDB2O43679 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LDB2O43679 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LDB2O43679 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LDB2O43679 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LDB2O43679 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LDB2O43679 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.73■□□□□ 0.43
LDB2O43679 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LDB2O43679 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LDB2O43679 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LDB2O43679 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LDB2O43679 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LDB2O43679 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.73■□□□□ 0.43
LDB2O43679 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LDB2O43679 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LDB2O43679 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LDB2O43679 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LDB2O43679 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.73■□□□□ 0.43
LDB2O43679 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.73■□□□□ 0.43
LDB2O43679 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.73■□□□□ 0.43
LDB2O43679 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LDB2O43679 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.73■□□□□ 0.43
LDB2O43679 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.73■□□□□ 0.43
LDB2O43679 AP002414.4-201ENST00000589764 1148 ntBASIC17.73■□□□□ 0.43
LDB2O43679 NPAP1P7-201ENST00000613027 823 ntBASIC17.73■□□□□ 0.43
LDB2O43679 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.73■□□□□ 0.43
LDB2O43679 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.73■□□□□ 0.43
LDB2O43679 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.73■□□□□ 0.43
LDB2O43679 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LDB2O43679 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LDB2O43679 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LDB2O43679 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.73■□□□□ 0.43
LDB2O43679 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.73■□□□□ 0.43
LDB2O43679 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.73■□□□□ 0.43
LDB2O43679 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LDB2O43679 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LDB2O43679 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms