Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.92■□□□□ 0.3
CLOCKO15516 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLOCKO15516 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLOCKO15516 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.92■□□□□ 0.3
CLOCKO15516 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLOCKO15516 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.92■□□□□ 0.3
CLOCKO15516 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.92■□□□□ 0.3
CLOCKO15516 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CLOCKO15516 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLOCKO15516 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.92■□□□□ 0.3
CLOCKO15516 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.92■□□□□ 0.3
CLOCKO15516 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CLOCKO15516 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.91■□□□□ 0.3
CLOCKO15516 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.91■□□□□ 0.3
CLOCKO15516 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.91■□□□□ 0.3
CLOCKO15516 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLOCKO15516 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLOCKO15516 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLOCKO15516 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CLOCKO15516 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLOCKO15516 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.91■□□□□ 0.3
CLOCKO15516 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLOCKO15516 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLOCKO15516 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLOCKO15516 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.91■□□□□ 0.3
CLOCKO15516 FAM207BP-201ENST00000447172 505 ntBASIC16.91■□□□□ 0.3
CLOCKO15516 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.91■□□□□ 0.3
CLOCKO15516 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.91■□□□□ 0.3
CLOCKO15516 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.91■□□□□ 0.3
CLOCKO15516 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.91■□□□□ 0.3
CLOCKO15516 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.91■□□□□ 0.3
CLOCKO15516 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLOCKO15516 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CLOCKO15516 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLOCKO15516 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLOCKO15516 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLOCKO15516 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CLOCKO15516 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLOCKO15516 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLOCKO15516 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLOCKO15516 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLOCKO15516 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.91■□□□□ 0.3
CLOCKO15516 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLOCKO15516 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLOCKO15516 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLOCKO15516 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLOCKO15516 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLOCKO15516 CROCCP2-202ENST00000412962 2773 ntBASIC16.9■□□□□ 0.3
CLOCKO15516 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLOCKO15516 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.9■□□□□ 0.3
CLOCKO15516 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLOCKO15516 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLOCKO15516 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLOCKO15516 KRT8P9-201ENST00000558927 1449 ntBASIC16.9■□□□□ 0.3
CLOCKO15516 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLOCKO15516 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CLOCKO15516 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLOCKO15516 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLOCKO15516 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CLOCKO15516 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.9■□□□□ 0.3
CLOCKO15516 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.9■□□□□ 0.3
CLOCKO15516 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.9■□□□□ 0.3
CLOCKO15516 AC008040.2-201ENST00000461049 708 ntBASIC16.9■□□□□ 0.3
CLOCKO15516 AC011506.1-201ENST00000474329 610 ntBASIC16.9■□□□□ 0.3
CLOCKO15516 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLOCKO15516 NAPSB-206ENST00000562112 1266 ntBASIC16.9■□□□□ 0.3
CLOCKO15516 AC010331.1-201ENST00000611423 582 ntBASIC16.9■□□□□ 0.3
CLOCKO15516 AC130371.2-201ENST00000619443 611 ntBASIC16.9■□□□□ 0.3
CLOCKO15516 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLOCKO15516 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.9■□□□□ 0.3
CLOCKO15516 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLOCKO15516 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLOCKO15516 AC009102.3-201ENST00000623118 1491 ntBASIC16.9■□□□□ 0.3
CLOCKO15516 AC133963.1-201ENST00000504166 1679 ntBASIC16.9■□□□□ 0.3
CLOCKO15516 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLOCKO15516 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLOCKO15516 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.9■□□□□ 0.3
CLOCKO15516 AL163051.1-201ENST00000569214 1512 ntBASIC16.9■□□□□ 0.3
CLOCKO15516 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLOCKO15516 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLOCKO15516 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLOCKO15516 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLOCKO15516 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
CLOCKO15516 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLOCKO15516 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLOCKO15516 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLOCKO15516 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLOCKO15516 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLOCKO15516 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLOCKO15516 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLOCKO15516 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.89■□□□□ 0.29
CLOCKO15516 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.89■□□□□ 0.29
CLOCKO15516 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLOCKO15516 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CLOCKO15516 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.89■□□□□ 0.29
CLOCKO15516 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLOCKO15516 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLOCKO15516 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLOCKO15516 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLOCKO15516 B3GAT3P1-201ENST00000471720 806 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms